(Q30947722)

25 September 2017

Low cost, high performance processing of single particle cryo-electron microscopy data in the cloud (English)

1 reference

cryogenic electron microscopy

25 September 2017

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Andres E Leschziner

2

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author name string

Michael A Cianfrocco

series ordinal

1

1 reference

PMC publication ID

4440898

25 September 2017

language of work or name

English

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publication date

8 May 2015

1 reference

25 September 2017

1 reference

25 September 2017

4

1 reference

How cryo-EM is revolutionizing structural biology

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440898

Benchmarking undedicated cloud computing providers for analysis of genomic datasets

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440898

21 June 2018

Cryo-EM enters a new era

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440898

Three-dimensional structure of human γ-secretase

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440898

Electron counting and beam-induced motion correction enable near-atomic-resolution single-particle cryo-EM.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440898

Ribosome structures to near-atomic resolution from thirty thousand cryo-EM particles

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440898

Accelerating 3B single-molecule super-resolution microscopy with cloud computing

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440898

Cloud CPFP: a shotgun proteomics data analysis pipeline using cloud and high performance computing

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440898

Movies of ice-embedded particles enhance resolution in electron cryo-microscopy

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440898

RELION: implementation of a Bayesian approach to cryo-EM structure determination

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440898

Cloud parallel processing of tandem mass spectrometry based proteomics data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440898

Cloud BioLinux: pre-configured and on-demand bioinformatics computing for the genomics community

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440898

SPARX, a new environment for Cryo-EM image processing

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440898

EMAN2: an extensible image processing suite for electron microscopy

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440898

FREALIGN: high-resolution refinement of single particle structures

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440898

XMIPP: a new generation of an open-source image processing package for electron microscopy.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440898

UCSF Chimera--a visualization system for exploratory research and analysis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440898

Accurate determination of local defocus and specimen tilt in electron microscopy

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440898

EMAN: semiautomated software for high-resolution single-particle reconstructions

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440898

SPIDER and WEB: processing and visualization of images in 3D electron microscopy and related fields

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440898

Experimental observation of the improvement in MTF from backthinning a CMOS direct electron detector

21 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.7554%2FELIFE.06664

Beam-induced motion correction for sub-megadalton cryo-EM particles.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.7554%2FELIFE.06664

21 January 2018

Identifiers

DOI

10.7554/ELIFE.06664

1 reference

25 September 2017

1 reference

PMC publication ID

4440898

25 September 2017

PubMed publication ID

25955969

1 reference

PMC publication ID

4440898