(Q30966798)

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SaDA: From Sampling to Data Analysis-An Extensible Open Source Infrastructure for Rapid, Robust and Automated Management and Analysis of Modern Ecological High-Throughput Microarray Data

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

6 October 2017

SaDA: From Sampling to Data Analysis-An Extensible Open Source Infrastructure for Rapid, Robust and Automated Management and Analysis of Modern Ecological High-Throughput Microarray Data (English)

1 reference

Europe PubMed Central

PMC publication ID

6 October 2017

0 references

open-source software

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1 reference

based on heuristic

inferred from title

Kumar Saurabh Singh

object named as

Kumar Saurabh Singh

1

0 references

author name string

Dominique Thual

2

1 reference

Europe PubMed Central

PMC publication ID

6 October 2017

Roberto Spurio

3

1 reference

Europe PubMed Central

PMC publication ID

6 October 2017

Nicola Cannata

4

1 reference

Europe PubMed Central

PMC publication ID

6 October 2017

publication date

3 June 2015

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Europe PubMed Central

PMC publication ID

6 October 2017

International Journal of Environmental Research and Public Health

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Europe PubMed Central

PMC publication ID

6 October 2017

12

1 reference

Europe PubMed Central

PMC publication ID

6 October 2017

6

1 reference

Europe PubMed Central

PMC publication ID

6 October 2017

6352-6366

1 reference

Europe PubMed Central

PMC publication ID

6 October 2017

copyright license

Creative Commons Attribution 4.0 International

3 June 2015

1 reference

April 2022 Public Data File from Crossref

copyright status

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describes a project that uses

1 reference

Europe PubMed Central

26 June 2022

https://europepmc.org/article/PMC/PMC4483705

based on heuristic

inferred from PubMed Central ID database lookup

maintained by WikiProject

WikiProject Ecology

1 reference

based on heuristic

inferred from title

SMITH: a LIMS for handling next-generation sequencing workflows

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4483705

21 June 2018

The Wasp System: an open source environment for managing and analyzing genomic data.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4483705

21 June 2018

openBIS: a flexible framework for managing and analyzing complex data in biology research

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4483705

21 June 2018

A case study for efficient management of high throughput primary lab data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4483705

21 June 2018

Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4483705

21 June 2018

LabKey Server: an open source platform for scientific data integration, analysis and collaboration

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4483705

21 June 2018

Next generation tools for genomic data generation, distribution, and visualization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4483705

21 June 2018

SLIMS--a user-friendly sample operations and inventory management system for genotyping labs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4483705

21 June 2018

iLAP: a workflow-driven software for experimental protocol development, data acquisition and analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4483705

21 June 2018

BASE--2nd generation software for microarray data management and analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4483705

21 June 2018

PASSIM--an open source software system for managing information in biomedical studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4483705

21 June 2018

A simple spreadsheet-based, MIAME-supportive format for microarray data: MAGE-TAB

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4483705

21 June 2018

Galaxy: a platform for interactive large-scale genome analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4483705

21 June 2018

MARS: microarray analysis, retrieval, and storage system

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4483705

21 June 2018

ArrayPipe: a flexible processing pipeline for microarray data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4483705

21 June 2018

ArrayNorm: comprehensive normalization and analysis of microarray data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4483705

21 June 2018

TM4: a free, open-source system for microarray data management and analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4483705

21 June 2018

Completing the data life cycle: using information management in macrosystems ecology research

1 reference

https://api.crossref.org/works/10.3390%2FIJERPH120606352

21 January 2018

Galaxy LIMS for next-generation sequencing.

1 reference

https://api.crossref.org/works/10.3390%2FIJERPH120606352

21 January 2018

GPR-Analyzer: a simple tool for quantitative analysis of hierarchical multispecies microarrays.

1 reference

https://api.crossref.org/works/10.3390%2FIJERPH120606352

21 January 2018

Macrosystems ecology: understanding ecological patterns and processes at continental scales

1 reference

https://api.crossref.org/works/10.3390%2FIJERPH120606352

21 January 2018

Improving the culture of interdisciplinary collaboration in ecology by expanding measures of success

1 reference

https://api.crossref.org/works/10.3390%2FIJERPH120606352

21 January 2018

Identifiers

10.3390/IJERPH120606352

1 reference

Europe PubMed Central

PMC publication ID

6 October 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

6 October 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

6 October 2017

ResearchGate publication ID

0 references

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