(Q30982552)

15 August 2017

Alternative preprocessing of RNA-Sequencing data in The Cancer Genome Atlas leads to improved analysis results (English)

1 reference

15 August 2017

1 reference

The Cancer Genome Atlas

1 reference

Mumtahena Rahman

1

1 reference

15 August 2017

Laurie K Jackson

2

1 reference

15 August 2017

W Evan Johnson

3

1 reference

15 August 2017

Dean Y Li

4

1 reference

15 August 2017

Andrea H Bild

5

1 reference

15 August 2017

Stephen R Piccolo

6

1 reference

15 August 2017

language of work or name

English

0 references

publication date

24 July 2015

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15 August 2017

7

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based on heuristic

inferred from page(s)

published in

Bioinformatics

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15 August 2017

31

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15 August 2017

3666-3672

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15 August 2017

22

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describes a project that uses

15 August 2017

limma

1 reference

22 June 2022

https://europepmc.org/article/PMC/4804769

based on heuristic

inferred from PubMed Central ID database lookup

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RNA-Seq gene profiling--a systematic empirical comparison

21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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Exploring TCGA Pan-Cancer data at the UCSC Cancer Genomics Browser

21 June 2018

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21 June 2018

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21 June 2018

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Integrative analysis of complex cancer genomics and clinical profiles using the cBioPortal

21 June 2018

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A comprehensive evaluation of normalization methods for Illumina high-throughput RNA sequencing data analysis

21 June 2018

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Comprehensive genomic characterization of squamous cell lung cancers

21 June 2018

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A single-sample microarray normalization method to facilitate personalized-medicine workflows.

21 June 2018

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Measurement of mRNA abundance using RNA-seq data: RPKM measure is inconsistent among samples

21 June 2018

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21 June 2018

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RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

21 June 2018

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MapSplice: accurate mapping of RNA-seq reads for splice junction discovery.

21 June 2018

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Evaluation of statistical methods for normalization and differential expression in mRNA-Seq experiments

21 June 2018

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BEDTools: a flexible suite of utilities for comparing genomic features

21 June 2018

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The UCSC Cancer Genomics Browser

21 June 2018

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Mapping and quantifying mammalian transcriptomes by RNA-Seq

21 June 2018

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Linear models and empirical bayes methods for assessing differential expression in microarray experiments

21 June 2018

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21 June 2018

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Predicting the clinical status of human breast cancer by using gene expression profiles

21 June 2018

1 reference

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Identifying Important Risk Factors for Survival in Kidney Graft Failure Patients Using Random Survival Forests

21 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTV377

10.1093/BIOINFORMATICS/BTV377

21 January 2018

Identifiers

DOI

1 reference

journals/bioinformatics/RahmanJJLBP15

15 August 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

15 August 2017

1 reference