(Q30998731)

13 August 2017

Expanding the biotechnology potential of lactobacilli through comparative genomics of 213 strains and associated genera (English)

1 reference

13 August 2017

0 references

0 references

1 reference

16

1 reference

28 June 2017

27

Todd R Klaenhammer

1 reference

13 August 2017

Alexandra E Briner

23

0 references

Jakki C Cooney

Jakki C Cooney

9

0 references

Jarmo Ritari

Jarmo Ritari

19

0 references

Ian B Jeffery

Ian B Jeffery

8

0 references

Giovanna E. Felis

Giovanna E Felis

24

0 references

Rodolphe Barrangou

Rodolphe Barrangou

26

0 references

Paul W O'Toole

Paul W O'Toole

31

0 references

Willem de Vos

25

Willem M de Vos

1 reference

13 August 2017

22

Ruifu Yang

1 reference

13 August 2017

Zhihong Sun

1

1 reference

13 August 2017

Hugh M B Harris

2

1 reference

13 August 2017

Angela McCann

3

1 reference

13 August 2017

Chenyi Guo

4

1 reference

13 August 2017

Silvia Argimón

5

1 reference

13 August 2017

Wenyi Zhang

6

1 reference

13 August 2017

Xianwei Yang

7

1 reference

13 August 2017

Todd F Kagawa

10

1 reference

13 August 2017

Wenjun Liu

11

1 reference

13 August 2017

Yuqin Song

12

1 reference

13 August 2017

Elisa Salvetti

13

1 reference

13 August 2017

Agnieszka Wrobel

14

1 reference

13 August 2017

Pia Rasinkangas

15

1 reference

13 August 2017

Mary C Rea

17

1 reference

13 August 2017

Orla O'Sullivan

18

1 reference

13 August 2017

François P Douillard

20

1 reference

13 August 2017

R Paul Ross

21

1 reference

13 August 2017

Page W Caufield

28

1 reference

13 August 2017

Yujun Cui

29

1 reference

13 August 2017

Heping Zhang

30

1 reference

13 August 2017

language of work or name

English

0 references

publication date

29 September 2015

1 reference

13 August 2017

Nature Communications

1 reference

13 August 2017

6

1 reference

13 August 2017

8322

1 reference

Creative Commons Attribution 4.0 International

13 August 2017

start time

29 September 2015

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Unusual genome complexity in Lactobacillus salivarius JCM1046.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

CRISPR-Cas9-assisted recombineering in Lactobacillus reuteri

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

Epithelial adhesion mediated by pilin SpaC is required for Lactobacillus rhamnosus GG-induced cellular responses.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

Expert consensus document. The International Scientific Association for Probiotics and Prebiotics consensus statement on the scope and appropriate use of the term probiotic

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

CRISPR-Cas systems: Prokaryotes upgrade to adaptive immunity

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

Classification and evolution of type II CRISPR-Cas systems

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

CRISPR-Cas systems for editing, regulating and targeting genomes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

Data, information, knowledge and principle: back to metabolism in KEGG

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

Systematic identification of gene families for use as "markers" for phylogenetic and phylogeny-driven ecological studies of bacteria and archaea and their major subgroups

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

Engineering lactococci and lactobacilli for human health

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

RNA-guided editing of bacterial genomes using CRISPR-Cas systems

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

Defining bacterial species in the genomic era: insights from the genus Acinetobacter

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

STRING v9.1: protein-protein interaction networks, with increased coverage and integration

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

A Programmable Dual-RNA-Guided DNA Endonuclease in Adaptive Bacterial Immunity

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

Phylogenomic analysis of bacterial and archaeal sequences with AMPHORA2.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

QuartetS: a fast and accurate algorithm for large-scale orthology detection

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

Comparative genomics of Lactobacillus

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

Phylogenomic reconstruction of lactic acid bacteria: an update

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

Evolution of bacterial phosphoglycerate mutases: non-homologous isofunctional enzymes undergoing gene losses, gains and lateral transfers

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

New perspectives for Lactobacilli exopolysaccharides

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

BAGEL2: mining for bacteriocins in genomic data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

Mucosal adhesion properties of the probiotic Lactobacillus rhamnosus GG SpaCBA and SpaFED pilin subunits.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

Genomics. Genome project standards in a new era of sequencing

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

Comparative genomic analysis of Lactobacillus rhamnosus GG reveals pili containing a human- mucus binding protein

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

Dendritic cell targeting of Bacillus anthracis protective antigen expressed by Lactobacillus acidophilus protects mice from lethal challenge

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

Model for substrate interactions in C5a peptidase from Streptococcus pyogenes: A 1.9 A crystal structure of the active form of ScpA

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

Lactobacillus phylogenomics--towards a reclassification of the genus

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

Recent developments in the MAFFT multiple sequence alignment program

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

Safety assessment of dairy microorganisms: the Lactobacillus genus

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

Amylolytic bacterial lactic acid fermentation - a review

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

Distribution of megaplasmids in Lactobacillus salivarius and other lactobacilli

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

KAAS: an automatic genome annotation and pathway reconstruction server

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

The CRISPRdb database and tools to display CRISPRs and to generate dictionaries of spacers and repeats

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

CRISPR Provides Acquired Resistance Against Viruses in Prokaryotes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

Identifying bacterial genes and endosymbiont DNA with Glimmer

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

DNA-DNA hybridization values and their relationship to whole-genome sequence similarities

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

Comparative genomics of the lactic acid bacteria

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

Beneficial lactobacilli in food and feed: long-term use, biodiversity and proposals for specific and realistic safety assessments

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

Helicobacter pylori phase variation, immune modulation and gastric autoimmunity

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

Identification and molecular cloning of a novel glycoside hydrolase family of core 1 type O-glycan-specific endo-alpha-N-acetylgalactosaminidase from Bifidobacterium longum.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

InterProScan: protein domains identifier

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

Effect of dimer dissociation on activity and thermostability of the alpha-glucuronidase from Geobacillus stearothermophilus: dissecting the different oligomeric forms of family 67 glycoside hydrolases

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

Molecular cloning and characterization of Bifidobacterium bifidum 1,2-alpha-L-fucosidase (AfcA), a novel inverting glycosidase (glycoside hydrolase family 95)

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

MUSCLE: multiple sequence alignment with high accuracy and high throughput

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

The COG database: an updated version includes eukaryotes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

The TIGRFAMs database of protein families

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

Microbial xylanases and their industrial applications: a review

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

Artemis: sequence visualization and annotation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

Multi-domain, cell-envelope proteinases of lactic acid bacteria

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

Surface proteins of gram-positive bacteria and mechanisms of their targeting to the cell wall envelope

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

A structural explanation for the twilight zone of protein sequence homology

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

Carbohydrate metabolism in lactic acid bacteria

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

Basic local alignment search tool

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4667430

The Genus Lactobacillus: A Taxonomic Update.

21 June 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS9322

The impact of probiotics and prebiotics on the immune system.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS9322

Diversity of the genus Lactobacillus revealed by comparative genomics of five species

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS9322

Dichotomy in post-genomic microbiology.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS9322

alpha-Chitinase activity among lactic acid bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS9322

Lactocepin secreted by Lactobacillus exerts anti-inflammatory effects by selectively degrading proinflammatory chemokines.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS9322

LOCP--locating pilus operons in gram-positive bacteria.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS9322

Probiotic formulations and applications, the current probiotics market, and changes in the marketplace: a European perspective

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26415554

12 December 2020

inferred from PubMed ID database lookup

Convergence in probiotic Lactobacillus gut-adaptive responses in humans and mice

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26415554

12 December 2020

inferred from PubMed ID database lookup

Glycogen with short average chain length enhances bacterial durability

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26415554

12 December 2020

inferred from PubMed ID database lookup

Lactic acid properties, applications and production: A review

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS9322

7 January 2021

inferred from DOI database lookup

Identifiers

DOI

10.1038/NCOMMS9322

1 reference

Dimensions Publication ID

13 August 2017

0 references

0 references

1 reference

13 August 2017

1 reference