(Q31004138)

14 October 2017

Effect of hexafluoroisopropanol alcohol on the structure of melittin: a molecular dynamics simulation study (English)

1 reference

molecular dynamics simulation

14 October 2017

0 references

author

Danilo Roccatano

series ordinal

1

1 reference

14 October 2017

4

1 reference

14 October 2017

3

Martin Zacharias

1 reference

14 October 2017

Marco Fioroni

2

1 reference

14 October 2017

9 September 2005

1 reference

14 October 2017

1 reference

14 October 2017

14

1 reference

14 October 2017

10

1 reference

14 October 2017

2582-2589

1 reference

Structure and solvation of melittin in 1,1,1,3,3,3-hexafluoro-2-propanol/water

14 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253304

Interplay between hydrophobic cluster and loop propensity in beta-hairpin formation: a mechanistic study

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253304

Mechanism by which 2,2,2-trifluoroethanol/water mixtures stabilize secondary-structure formation in peptides: a molecular dynamics study

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253304

Solvation phenomena of a tetrapeptide in water/trifluoroethanol and water/ethanol mixtures: a diffusion NMR, intermolecular NOE, and molecular dynamics study

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253304

Evidence of complete hydrophobic coating of bombesin by trifluoroethanol in aqueous solution: an NMR spectroscopic and molecular dynamics study.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253304

Folding and stability of the three-stranded beta-sheet peptide Betanova: insights from molecular dynamics simulations

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253304

Protein-induced membrane disorder: a molecular dynamics study of melittin in a dipalmitoylphosphatidylcholine bilayer

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253304

Trifluoroethanol and colleagues: cosolvents come of age. Recent studies with peptides and proteins.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253304

The structure of the melittin tetramer at different temperatures--an NOE-based calculation with chemical shift refinement

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253304

Molecular dynamics simulation of melittin in a dimyristoylphosphatidylcholine bilayer membrane

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253304

Importance of explicit salt ions for protein stability in molecular dynamics simulation.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253304

Pathways for protein folding: is a new view needed?

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253304

Hydrogen bonding in helical polypeptides from molecular dynamics simulations and amide hydrogen exchange analysis: alamethicin and melittin in methanol

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253304

Cooperative alpha-helix formation of beta-lactoglobulin and melittin induced by hexafluoroisopropanol

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253304

MOLMOL: a program for display and analysis of macromolecular structures

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253304

Nonideality of water-hexafluoropropanol mixtures as studied by X-ray small angle scattering

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253304

High-resolution 1H-NMR studies of self-aggregation of melittin in aqueous solution

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253304

Melittin forms crystals which are suitable for high resolution X-ray structural analysis and which reveal a molecular 2-fold axis of symmetry.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253304

Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253304

GROMACS 3.0: a package for molecular simulation and trajectory analysis

21 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1110%2FPS.051426605

Fluoroalcohol-induced structural changes of proteins: some aspects of cosolvent-protein interactions

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253304

Molecular dynamics simulations of isolated helices of myoglobin

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253304

Quantitative determination of helical propensities from trifluoroethanol titration curves

25 November 2018

1 reference

12 December 2020

Main chain and side chain dynamics of peptides in liquid solution from 13C NMR: melittin as a model peptide

1 reference

12 December 2020

Impact of Cl- and Na+ ions on simulated structure and dynamics of betaARK1 PH domain

1 reference

12 December 2020

Comparison of different schemes to treat long-range electrostatic interactions in molecular dynamics simulations of a protein crystal

1 reference

12 December 2020

Identifiers

DOI

10.1110/PS.051426605

1 reference

14 October 2017

1 reference

PMC publication ID

2253304

14 October 2017

PubMed publication ID

16155200

1 reference

PMC publication ID

2253304