(Q31049058)

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Galaxy-M: a Galaxy workflow for processing and analyzing direct infusion and liquid chromatography mass spectrometry-based metabolomics data

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

15 August 2017

Galaxy-M: a Galaxy workflow for processing and analyzing direct infusion and liquid chromatography mass spectrometry-based metabolomics data (English)

1 reference

Europe PubMed Central

PMC publication ID

15 August 2017

1 reference

based on heuristic

inferred from title

1 reference

based on heuristic

inferred from title

5

object named as

Mark R Viant

1 reference

Europe PubMed Central

PMC publication ID

15 August 2017

2

object named as

Ralf J M Weber

1 reference

Europe PubMed Central

PMC publication ID

15 August 2017

author name string

Robert L Davidson

1

1 reference

Europe PubMed Central

PMC publication ID

15 August 2017

Haoyu Liu

3

1 reference

Europe PubMed Central

PMC publication ID

15 August 2017

Archana Sharma-Oates

4

1 reference

Europe PubMed Central

PMC publication ID

15 August 2017

publication date

23 February 2016

1 reference

Europe PubMed Central

PMC publication ID

15 August 2017

1 reference

Europe PubMed Central

PMC publication ID

15 August 2017

5

1 reference

Europe PubMed Central

PMC publication ID

15 August 2017

10

1 reference

Europe PubMed Central

PMC publication ID

15 August 2017

Direct infusion mass spectrometry metabolomics dataset: a benchmark for data processing and quality control

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765054

21 June 2018

Non-targeted metabolomics and lipidomics LC-MS data from maternal plasma of 180 healthy pregnant women

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765054

21 June 2018

Workflow4Metabolomics: a collaborative research infrastructure for computational metabolomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765054

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Using Galaxy-P to leverage RNA-Seq for the discovery of novel protein variations

1 reference

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21 June 2018

Dissemination of scientific software with Galaxy ToolShed

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765054

21 June 2018

Omics technologies and the study of human ageing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765054

21 June 2018

The Taverna workflow suite: designing and executing workflows of Web Services on the desktop, web or in the cloud

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765054

21 June 2018

MetaboLights--an open-access general-purpose repository for metabolomics studies and associated meta-data

1 reference

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Comparative genomics in ecological physiology: toward a more nuanced understanding of acclimation and adaptation

1 reference

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21 June 2018

Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765054

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Ergatis: a web interface and scalable software system for bioinformatics workflows

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765054

21 June 2018

A signal filtering method for improved quantification and noise discrimination in fourier transform ion cyclotron resonance mass spectrometry-based metabolomics data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765054

21 June 2018

Metabolic profiling, metabolomic and metabonomic procedures for NMR spectroscopy of urine, plasma, serum and tissue extracts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765054

21 June 2018

XCMS: processing mass spectrometry data for metabolite profiling using nonlinear peak alignment, matching, and identification

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765054

21 June 2018

An integrative genomics approach to infer causal associations between gene expression and disease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765054

21 June 2018

Metabonomics: a platform for studying drug toxicity and gene function

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765054

21 June 2018

Environmental metabolomics: a critical review and future perspectives

1 reference

https://api.crossref.org/works/10.1186%2FS13742-016-0115-8

21 January 2018

Dynamic range and mass accuracy of wide-scan direct infusion nanoelectrospray fourier transform ion cyclotron resonance mass spectrometry-based metabolomics increased by the spectral stitching method.

1 reference

https://api.crossref.org/works/10.1186%2FS13742-016-0115-8

21 January 2018

Pregnancy-induced metabolic phenotype variations in maternal plasma

1 reference

https://api.crossref.org/works/10.1186%2FS13742-016-0115-8

21 January 2018

Algorithms and tools for the preprocessing of LC–MS metabolomics data

1 reference

https://api.crossref.org/works/10.1186%2FS13742-016-0115-8

21 January 2018

Procedures for large-scale metabolic profiling of serum and plasma using gas chromatography and liquid chromatography coupled to mass spectrometry

1 reference

https://api.crossref.org/works/10.1186%2FS13742-016-0115-8

21 January 2018

Workflows for Heliophysics

1 reference

https://api.crossref.org/works/10.1186%2FS13742-016-0115-8

21 January 2018

MI-Pack: Increased confidence of metabolite identification in mass spectra by integrating accurate masses and metabolic pathways

1 reference

https://api.crossref.org/works/10.1186%2FS13742-016-0115-8

21 January 2018

Characterization of Isotopic Abundance Measurements in High Resolution FT-ICR and Orbitrap Mass Spectra for Improved Confidence of Metabolite Identification

1 reference

https://api.crossref.org/works/10.1186%2FS13742-016-0115-8

21 January 2018

Missing values in mass spectrometry based metabolomics: an undervalued step in the data processing pipeline

1 reference

https://api.crossref.org/works/10.1186%2FS13742-016-0115-8

21 January 2018

Probabilistic quotient normalization as robust method to account for dilution of complex biological mixtures. Application in 1H NMR metabonomics

1 reference

https://pubmed.ncbi.nlm.nih.gov/26913198

12 December 2020

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Identifiers

10.1186/S13742-016-0115-8

1 reference

Europe PubMed Central

PMC publication ID

15 August 2017

Dimensions Publication ID

0 references

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

15 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

15 August 2017

ResearchGate publication ID

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