(Q31052600)

28 June 2017

Evolution of BK virus based on complete genome data (English)

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28 June 2017

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whole genome sequencing

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Yuriko Nishimoto

1

1 reference

28 June 2017

Tomokazu Takasaka

2

1 reference

28 June 2017

Masami Hasegawa

3

1 reference

28 June 2017

Huai-Ying Zheng

4

1 reference

28 June 2017

Qin Chen

5

1 reference

28 June 2017

Chie Sugimoto

6

1 reference

28 June 2017

Tadaichi Kitamura

7

1 reference

28 June 2017

Yoshiaki Yogo

8

1 reference

28 June 2017

28 July 2006

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Journal of Molecular Evolution

28 June 2017

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28 June 2017

63

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28 June 2017

3

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28 June 2017

341-352

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https://scigraph.springernature.com/pub.10.1007/s00239-005-0092-5

28 June 2017

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cites work

Persistence of DNA Sequences of BK Virus and JC Virus in Normal Human Tissues and in Diseased Tissues

1 reference

https://api.crossref.org/works/10.1007%2FS00239-005-0092-5

A prospective study of human polyomavirus infection in pregnancy

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00239-005-0092-5

Preponderance of slightly deleterious polymorphism in mitochondrial DNA: nonsynonymous/synonymous rate ratio is much higher within species than between species.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00239-005-0092-5

The persistence of papovavirus BK DNA sequences in normal human renal tissue

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00239-005-0092-5

Performance of a divergence time estimation method under a probabilistic model of rate evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00239-005-0092-5

Estimating the rate of evolution of the rate of molecular evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00239-005-0092-5

Likelihood ratio tests for detecting positive selection and application to primate lysozyme evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00239-005-0092-5

Models of amino acid substitution and applications to mitochondrial protein evolution.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00239-005-0092-5

Evolution of Human Polyomavirus JC: Implications for the Population History of Humans

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00239-005-0092-5

BK virus antigenic variants: sequence analysis within the capsid VP1 epitope

21 January 2018

1 reference

12 December 2020

Complete nucleotide sequence of polyomavirus SA12.

1 reference

12 December 2020

New human papovavirus (B.K.) isolated from urine after renal transplantation

1 reference

12 December 2020

Simian agent 12 is a BK virus-like papovavirus which replicates in monkey cells

1 reference

12 December 2020

A codon-based model of nucleotide substitution for protein-coding DNA sequences

1 reference

12 December 2020

Likelihood models for detecting positively selected amino acid sites and applications to the HIV-1 envelope gene

1 reference

12 December 2020

Statistical methods for detecting molecular adaptation

1 reference

12 December 2020

Confidence Limits on Phylogenies: an Approach using the Bootstrap

1 reference

12 December 2020

Prevalence and distribution of BK virus subtypes in healthy people and immunocompromised patients detected by PCR-restriction enzyme analysis

1 reference

12 December 2020

The genome of human papovavirus BKV

1 reference

12 December 2020

BK Virus DNA: Complete Nucleotide Sequence of a Human Tumor Virus

1 reference

12 December 2020

Two types of amino acid substitutions in protein evolution

1 reference

12 December 2020

The general stochastic model of nucleotide substitution

1 reference

12 December 2020

Time scale of eutherian evolution estimated without assuming a constant rate of molecular evolution

1 reference

12 December 2020

Widespread adaptive evolution in the human immunodeficiency virus type 1 genome

1 reference

12 December 2020

Rapid genomic typing of BK virus directly from clinical specimens

1 reference

12 December 2020

Genomic typing of BK virus in clinical specimens by direct sequencing of polymerase chain reaction products

1 reference

12 December 2020

Detecting excess radical replacements in phylogenetic trees

1 reference

12 December 2020

Mitochondrial phylogenetics and evolution of mysticete whales.

1 reference

12 December 2020

Bayes empirical bayes inference of amino acid sites under positive selection

1 reference

12 December 2020

Molecular genotyping of BK and JC viruses in human polyomavirus-associated interstitial nephritis after renal transplantation

1 reference

12 December 2020

Subtypes of BK virus prevalent in Japan and variation in their transcriptional control region

1 reference

12 December 2020

Tests for comparing related amino-acid sequences. Cytochrome c and cytochrome c551

1 reference

12 December 2020

Human papovavirus isolated from urine of a child with acute tonsillitis

1 reference

12 December 2020

Typing of human polyomavirus JC virus on the basis of restriction fragment length polymorphisms

1 reference

12 December 2020

Characterization of SA12 as a simian virus 40-related papovavirus of chacma baboons

1 reference

12 December 2020

Isolation of a variant of BK virus with altered restriction endonuclease pattern

1 reference

12 December 2020

Among-site rate variation and its impact on phylogenetic analyses

1 reference

12 December 2020

Molecular evolution of mRNA: a method for estimating evolutionary rates of synonymous and amino acid substitutions from homologous nucleotide sequences and its application

1 reference

12 December 2020

Converting distance to time: application to human evolution

1 reference

12 December 2020

MODELTEST: testing the model of DNA substitution

1 reference

12 December 2020

Maximum likelihood estimation on large phylogenies and analysis of adaptive evolution in human influenza virus A.

1 reference

12 December 2020

PAML: a program package for phylogenetic analysis by maximum likelihood

1 reference

12 December 2020

Genome Analysis of BK (WW) Viral DNA Cloned Directly from Human Urine

1 reference

12 December 2020

Detection of BK polyomavirus genotypes in healthy and HIV-positive children

1 reference

12 December 2020

Nucleotide sequence of the human polyomavirus AS virus, an antigenic variant of BK virus.

1 reference

12 December 2020

Reevaluation of amino acid variability of the human immunodeficiency virus type 1 gp120 envelope glycoprotein and prediction of new discontinuous epitopes

1 reference

12 December 2020

Analysis of 15 novel full-length BK virus sequences from three individuals: evidence of a high intra-strain genetic diversity

1 reference

12 December 2020

BK virus-associated nephropathy in kidney transplant recipients

1 reference

12 December 2020

JC virus genotyping offers a new paradigm in the study of human populations

1 reference

12 December 2020

BK virus and a new type of JC virus excreted by HIV-1 positive patients in rural Tanzania

1 reference

12 December 2020

Physical map of the BK virus genome

1 reference

12 December 2020

Growth efficiency of naturally occurring BK virus variants in vivo and in vitro

1 reference

12 December 2020

Evolutionary trees from DNA sequences: A maximum likelihood approach

1 reference

12 December 2020

TOPALi: software for automatic identification of recombinant sequences within DNA multiple alignments

1 reference

12 December 2020

Amino acid difference formula to help explain protein evolution

1 reference

12 December 2020

Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in hominoidea

1 reference

12 December 2020

10.1007/S00239-005-0092-5

Identifiers

DOI

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Dimensions Publication ID

28 June 2017

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1 reference