(Q31058721)

16 October 2017

Accurately quantifying low-abundant targets amid similar sequences by revealing hidden correlations in oligonucleotide microarray data (English)

1 reference

Correction for Marcelino et al., Accurately quantifying low-abundant targets amid similar sequences by revealing hidden correlations in oligonucleotide microarray data

16 October 2017

corrigendum / erratum

0 references

author

Janelle R. Thompson

5

1 reference

16 October 2017

2

Vadim Backman

1 reference

16 October 2017

10

Martin F Polz

1 reference

16 October 2017

Luisa A Marcelino

1

1 reference

16 October 2017

Andres Donaldson

3

1 reference

16 October 2017

Claudia Steadman

4

1 reference

16 October 2017

Sarah Pacocha Preheim

6

1 reference

16 October 2017

Cynthia Lien

7

1 reference

16 October 2017

Eelin Lim

8

1 reference

16 October 2017

Daniele Veneziano

9

1 reference

16 October 2017

language of work or name

English

0 references

publication date

1 September 2006

1 reference

16 October 2017

6

1 reference

Proceedings of the National Academy of Sciences of the United States of America

inferred from page(s)

published in

1 reference

16 October 2017

103

1 reference

16 October 2017

37

1 reference

16 October 2017

13629-13634

1 reference

Rapid quantitative profiling of complex microbial populations

16 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1559406

Microbial risk indicators of early childhood caries.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1559406

Base pair interactions and hybridization isotherms of matched and mismatched oligonucleotide probes on microarrays

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1559406

E-Predict: a computational strategy for species identification based on observed DNA microarray hybridization patterns

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1559406

Computational improvements reveal great bacterial diversity and high metal toxicity in soil

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1559406

GenXHC: a probabilistic generative model for cross-hybridization compensation in high-density genome-wide microarray data

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1559406

Sequence dependence of cross-hybridization on short oligo microarrays

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1559406

Specific and nonspecific hybridization of oligonucleotide probes on microarrays

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1559406

16S rRNA gene-based oligonucleotide microarray for environmental monitoring of the betaproteobacterial order "Rhodocyclales"

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1559406

Fine-scale phylogenetic architecture of a complex bacterial community.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1559406

Detection of genes involved in biodegradation and biotransformation in microbial communities by using 50-mer oligonucleotide microarrays

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1559406

Diversity and dynamics of a north atlantic coastal Vibrio community.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1559406

Environmental genome shotgun sequencing of the Sargasso Sea

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1559406

Community structure and metabolism through reconstruction of microbial genomes from the environment

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1559406

ChipCheck--a program predicting total hybridization equilibria for DNA binding to small oligonucleotide microarrays

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1559406

Exploration, normalization, and summaries of high density oligonucleotide array probe level data

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1559406

Design of oligonucleotides for microarrays and perspectives for design of multi-transcriptome arrays

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1559406

Development and validation of a diagnostic microbial microarray for methanotrophs

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1559406

Modeling of DNA microarray data by using physical properties of hybridization

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1559406

A model of molecular interactions on short oligonucleotide microarrays

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1559406

Absolute mRNA concentrations from sequence-specific calibration of oligonucleotide arrays.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1559406

Oligonucleotide microarray for the study of functional gene diversity in the nitrogen cycle in the environment.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1559406

Assessing unmodified 70-mer oligonucleotide probe performance on glass-slide microarrays

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1559406

Hybridization of mismatched or partially matched DNA at surfaces

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1559406

Use of hybridization kinetics for differentiating specific from non-specific binding to oligonucleotide microarrays

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1559406

Quantitative detection of microbial genes by using DNA microarrays

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1559406

Development and evaluation of functional gene arrays for detection of selected genes in the environment

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1559406

Expression profiling using microarrays fabricated by an ink-jet oligonucleotide synthesizer

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1559406

A quantitative assessment of heterogeneity for surface-immobilized proteins

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1559406

Model-based analysis of oligonucleotide arrays: expression index computation and outlier detection

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1559406

Assessment of the sensitivity and specificity of oligonucleotide (50mer) microarrays

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1559406

Molecular interactions on microarrays

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1559406

Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1559406

Exploring the metabolic and genetic control of gene expression on a genomic scale

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1559406

Stochastic models inspired by hybridization theory for short oligonucleotide arrays.

14 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0601476103

Genotypic diversity within a natural coastal bacterioplankton population.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0601476103

Validation of a more sensitive method for using spotted oligonucleotide DNA microarrays for functional genomics studies on bacterial communities.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0601476103

Application and validation of DNA microarrays for the 16S rRNA-based analysis of marine bacterioplankton.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0601476103

The human body as microbial observatory

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0601476103

Evaluation of 50-mer oligonucleotide arrays for detecting microbial populations in environmental samples.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1559406

Getting the noise out of gene arrays

25 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16950880

12 December 2020

inferred from PubMed ID database lookup

Ribosomal RNA phylogeny and the primary lines of evolutionary descent

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16950880

12 December 2020

inferred from PubMed ID database lookup

OligoArray: genome-scale oligonucleotide design for microarrays

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16950880

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1073/PNAS.0601476103

1 reference

16 October 2017

0 references

1 reference

16 October 2017

1 reference