(Q31090240)

28 June 2017

Phylogenetic comparison of protein-coding versus ribosomal RNA-coding sequence data: a case study of the Lecanoromycetes (Ascomycota). (English)

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28 June 2017

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4

François Lutzoni

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28 June 2017

2

Jolanta Miadlikowska

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28 June 2017

1

Valérie Hofstetter

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28 June 2017

3

Frank Kauff

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28 June 2017

25 October 2006

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Molecular Phylogenetics and Evolution

28 June 2017

15

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based on heuristic

inferred from page(s)

published in

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28 June 2017

44

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28 June 2017

1

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28 June 2017

412-426

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Bayes or bootstrap? A simulation study comparing the performance of Bayesian Markov chain Monte Carlo sampling and bootstrapping in assessing phylogenetic confidence

28 June 2017

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

Widespread occurrence of spliceosomal introns in the rDNA genes of ascomycetes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

Major clades of parmelioid lichens (Parmeliaceae, Ascomycota) and the evolution of their morphological and chemical diversity

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

The Comparative RNA Web (CRW) Site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs: Correction

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

Relationships of microsporidian genera, with emphasis on the polysporous genera, revealed by sequences of the largest subunit of RNA polymerase II (RPB1)

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

Terminal-sequence conservation identifies spliceosomal introns in ascomycete 18S RNA genes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

Early molecular investigations of lichen-forming symbionts: 1986-2001*.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

Numerous group I introns with variable distributions in the ribosomal DNA of a lichen fungus.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

Phylogeny and evolution of medical species of Candida and related taxa: a multigenic analysis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

Lower level relationships in the mushroom genus Cortinarius (Basidiomycota, Agaricales): a comparison of RPB1, RPB2, and ITS phylogenies

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

Eurotiomycetes: Eurotiomycetidae and Chaetothyriomycetidae

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

Microsporidia are related to Fungi: evidence from the largest subunit of RNA polymerase II and other proteins

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

Phylogenetic analyses of the Lyophylleae (Agaricales, Basidiomycota) based on nuclear and mitochondrial rDNA sequences

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

MRBAYES: Bayesian inference of phylogenetic trees

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

Reconstructing the early evolution of Fungi using a six-gene phylogeny

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

Phylogeny of the Gyalectales and Ostropales (Ascomycota, Fungi): among and within order relationships based on nuclear ribosomal RNA small and large subunits.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

Use of rRNA secondary structure in phylogenetic studies to identify homologous positions: an example of alignment and data presentation from the frogs

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

Lichenicolous Fungi: Interactions, Evolution, and Biodiversity

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

Polytomies and Bayesian phylogenetic inference

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

Models of Molecular Evolution and Phylogeny: Table 1

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

Body plan evolution of ascomycetes, as inferred from an RNA polymerase II phylogeny

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

Phylogenetic relationships among ascomycetes: evidence from an RNA polymerse II subunit.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

Supraordinal phylogenetic relationships of Lecanoromycetes based on a Bayesian analysis of combined nuclear and mitochondrial sequences

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

Performance of four ribosomal DNA regions to infer higher-level phylogenetic relationships of inoperculate euascomycetes (Leotiomyceta).

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

Integrating ambiguously aligned regions of DNA sequences in phylogenetic analyses without violating positional homology

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

Assembling the fungal tree of life: progress, classification, and evolution of subcellular traits

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

Improving phylogenetic inference of mushrooms with RPB1 and RPB2 nucleotide sequences (Inocybe; Agaricales)

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

Using RPB1 sequences to improve phylogenetic inference among mushrooms (Inocybe, Agaricales).

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

Phylogenetic classification of peltigeralean fungi (Peltigerales, Ascomycota) based on ribosomal RNA small and large subunits

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

Pseudocyphellaria perpetua, a New Lichen from Western North America

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

New insights into classification and evolution of the Lecanoromycetes (Pezizomycotina, Ascomycota) from phylogenetic analyses of three ribosomal RNA- and two protein-coding genes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

Multilocus sequence typing suggests the chytrid pathogen of amphibians is a recently emerged clone

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

MODELTEST: testing the model of DNA substitution

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

Transgenic DNA introgressed into traditional maize landraces in Oaxaca, Mexico

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

Contribution of RPB2 to multilocus phylogenetic studies of the euascomycetes (Pezizomycotina, Fungi) with special emphasis on the lichen-forming Acarosporaceae and evolution of polyspory

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

The general stochastic model of nucleotide substitution

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

Genome-scale approaches to resolving incongruence in molecular phylogenies

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

Subtractive cloning: past, present, and future

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

Heterogeneity of intron presence or absence in rDNA genes of the lichen species Physcia aipolia and P. stellaris

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

RAxML-III: a fast program for maximum likelihood-based inference of large phylogenetic trees

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

The origin of red algae: implications for plastid evolution

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

Phylogenetic Relationship of Cephaliophora to Nematophagous Hyphomycetes Including Taxonomic and Nomenclatural Emendations of the Genus Lecophagus

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

Molecular phylogeny of Zygomycota based on EF-1alpha and RPB1 sequences: limitations and utility of alternative markers to rDNA.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

Evolutionary relationships among basal fungi (Chytridiomycota and Zygomycota): Insights from molecular phylogenetics.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

Phylogenetic relationships of Lecanoromycetes (Ascomycota) as revealed by analyses of mtSSU and nLSU rDNA sequence data

7 January 2021

2 references

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

7 January 2021

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

inferred from DOI database lookup

7 January 2021

based on heuristic

Inheritance of DNA methylation in Coprinus cinereus

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

Bias caused by template annealing in the amplification of mixtures of 16S rRNA genes by PCR

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.10.016

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1016/J.YMPEV.2006.10.016

1 reference

28 June 2017

1 reference

PubMed ID

17207641