(Q31097177)

28 June 2017

title

MALDI TOF MS profiling of bacteria at the strain level: a review (English)

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matrix-assisted laser desorption/ionization

28 June 2017

main subject

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author name string

Todd R Sandrin

series ordinal

1

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28 June 2017

Jason E Goldstein

series ordinal

2

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28 June 2017

Stephanie Schumaker

series ordinal

3

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28 June 2017

language of work or name

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19 September 2012

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Mass Spectrometry Reviews

28 June 2017

published in

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28 June 2017

volume

32

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28 June 2017

issue

3

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28 June 2017

page(s)

188-217

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Use of bioactive glass slides for matrix-assisted laser desorption/ionization analysis: application to microorganisms.

28 June 2017

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Identification and discrimination of Staphylococcus aureus strains using matrix-assisted laser desorption/ionization-time of flight mass spectrometry

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Rapid typing of bacteria using matrix-assisted laser desorption ionisation time-of-flight mass spectrometry and pattern recognition software

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Lipid fingerprinting of gram-positive lactobacilli by intact--matrix-assisted laser desorption/ionization mass spectrometry using a proton sponge based matrix

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Discrimination between wild-type and ampicillin-resistant Escherichia coli by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry

21 January 2018

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Rapid identification of Staphylococci isolated in clinical microbiology laboratories by matrix-assisted laser desorption ionization-time of flight mass spectrometry

21 January 2018

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Mould routine identification in the clinical laboratory by matrix-assisted laser desorption ionization time-of-flight mass spectrometry

21 January 2018

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Bacillus cereus strains fall into two clusters (one closely and one more distantly related) to Bacillus anthracis according to amino acid substitutions in small acid-soluble proteins as determined by tandem mass spectrometry

21 January 2018

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Biomarker profiling and reproducibility study of MALDI-MS measurements of Escherichia coli by analysis of variance-principal component analysis

21 January 2018

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Comparison of two matrix-assisted laser desorption ionization-time of flight mass spectrometry methods with conventional phenotypic identification for routine identification of bacteria to the species level

21 January 2018

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The rapid identification of intact microorganisms using mass spectrometry

21 January 2018

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The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

21 January 2018

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Detection of norovirus capsid protein in authentic standards and in stool extracts by matrix-assisted laser desorption ionization and nanospray mass spectrometry

21 January 2018

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Bacterial species identification from MALDI-TOF mass spectra through data analysis and machine learning

21 January 2018

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Fourier-transform infrared spectroscopy combined with immunomagnetic separation as a tool to discriminate Salmonella serovars

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Mass spectrometry for rapid characterization of microorganisms

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Mass spectrometry in biodefense.

21 January 2018

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Microorganism identification by mass spectrometry and protein database searches

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Top-Down Proteomics for Rapid Identification of Intact Microorganisms

21 January 2018

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Species differentiation of a diverse suite of Bacillus spores by mass spectrometry-based protein profiling

21 January 2018

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Rapid classification and identification of salmonellae at the species and subspecies levels by whole-cell matrix-assisted laser desorption ionization-time of flight mass spectrometry .

21 January 2018

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The development of a matrix-assisted laser desorption/ionization mass spectrometry-based method for the protein fingerprinting and identification of Aeromonas species using whole cells

21 January 2018

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Identification of Staphylococcus aureus and determination of its methicillin resistance by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry.

21 January 2018

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Identification of a variety of Staphylococcus species by matrix-assisted laser desorption ionization-time of flight mass spectrometry

21 January 2018

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Discrimination and phylogenomic classification of Bacillus anthracis-cereus-thuringiensis strains based on LC-MS/MS analysis of whole cell protein digests

21 January 2018

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Ibis T5000: a universal biosensor approach for microbiology.

21 January 2018

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Rapid discrimination between methicillin-sensitive and methicillin-resistant Staphylococcus aureus by intact cell mass spectrometry

21 January 2018

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Detection of specific Bacillus anthracis spore biomarkers by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry

21 January 2018

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An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database

21 January 2018

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Bacillus spore identification via proteolytic peptide mapping with a miniaturized MALDI TOF mass spectrometer

21 January 2018

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Rapid typing and elucidation of new secondary metabolites of intact cyanobacteria using MALDI-TOF mass spectrometry

21 January 2018

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Liquid chromatography/mass spectrometry characterization of Escherichia coli and Shigella species

21 January 2018

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Induction and identification of disulfide-intact and disulfide-reduced β-subunit of Shiga toxin 2 from Escherichia coli O157:H7 using MALDI-TOF-TOF-MS/MS and top-down proteomics

21 January 2018

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Genomic and proteomic identification of a DNA-binding protein used in the "fingerprinting" of campylobacter species and strains by MALDI-TOF-MS protein biomarker analysis

21 January 2018

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Sub-speciating Campylobacter jejuni by proteomic analysis of its protein biomarkers and their post-translational modifications

21 January 2018

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Rapid identification of protein biomarkers of Escherichia coli O157:H7 by matrix-assisted laser desorption ionization-time-of-flight-time-of-flight mass spectrometry and top-down proteomics

21 January 2018

1 reference

Proteomic strategies for rapid characterization of micro-organisms

21 January 2018

1 reference

Speciation of coagulase negative staphylococci, isolated from indoor air, using SDS PAGE gel bands of expressed proteins followed by MALDI TOF MS and MALDI TOF-TOF MS-MS analysis of tryptic peptides

21 January 2018

1 reference

Phylogenetic classification and identification of bacteria by mass spectrometry

21 January 2018

1 reference

Rapid discrimination of Legionella by matrix-assisted laser desorption ionization time-of-flight mass spectrometry

21 January 2018

1 reference

Rapid identification of Legionella spp. by MALDI-TOF MS based protein mass fingerprinting

21 January 2018

1 reference

Microbial systematics in the post-genomics era.

21 January 2018

1 reference

Evaluation of MALDI-TOF MS as a tool for high-throughput dereplication

21 January 2018

1 reference

Characterization of environmental isolates of Enterococcus spp. by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry

21 January 2018

1 reference

Microbial fingerprinting using matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS) applications and challenges

21 January 2018

1 reference

Challenging the problem of clostridial identification with matrix-assisted laser desorption and ionization-time-of-flight mass spectrometry (MALDI-TOF MS).

21 January 2018

1 reference

Rapid identification and speciation of Haemophilus bacteria by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry

21 January 2018

1 reference

Typing of nitrogen-fixing Frankia strains by matrix-assisted laser desorption ionization-time-of-flight (MALDI-TOF) mass spectrometry

21 January 2018

1 reference

Discrimination of intact mycobacteria at the strain level: a combined MALDI-TOF MS and biostatistical analysis

21 January 2018

1 reference

Rapid identification of intact whole bacteria based on spectral patterns using matrix-assisted laser desorption/ionization with time-of-flight mass spectrometry

21 January 2018

1 reference

High-throughput mutation detection underlying adaptive evolution of Escherichia coli-K12.

21 January 2018

1 reference

Automated comparative sequence analysis by base-specific cleavage and mass spectrometry for nucleic acid-based microbial typing

21 January 2018

1 reference

MALDI-TOF-MS analysis of bacterial spores: wet heat-treatment as a new releasing technique for biomarkers and the influence of different experimental parameters and microbiological handling

21 January 2018

1 reference

21 January 2018

1 reference

Classification of Genus Pseudomonas by MALDI-TOF MS Based on Ribosomal Protein Coding in S10−spc−alpha Operon at Strain Level

21 January 2018

1 reference

Rapid determination of quinolone resistance in Acinetobacter spp.

21 January 2018

1 reference

MALDI-TOF analysis of polymerase chain reaction products from methanotrophic bacteria

21 January 2018

1 reference

Direct bacterial profiling by matrix-assisted laser desorption-ionization time-of-flight mass spectrometry for identification of pathogenic Neisseria

21 January 2018

1 reference

Application of matrix-assisted laser desorption/ionization time-of-flight mass spectrometry for the study of Helicobacter pylori

21 January 2018

1 reference

Identification of Yersinia pestis and Escherichia coli strains by whole cell and outer membrane protein extracts with mass spectrometry-based proteomics

21 January 2018

1 reference

Optimisation of intact cell MALDI method for fingerprinting of methicillin-resistant Staphylococcus aureus

21 January 2018

1 reference

Matrix-assisted ultraviolet laser desorption of non-volatile compounds

21 January 2018

1 reference

Determination of serotypes of Shiga toxin-producing Escherichia coli isolates by intact cell matrix-assisted laser desorption ionization-time of flight mass spectrometry.

21 January 2018

1 reference

Evaluation of matrix-assisted laser desorption/ionization (MALDI) preparation techniques for surface characterization of intact Fusarium spores by MALDI linear time-of-flight mass spectrometry

21 January 2018

1 reference

Compilation of a MALDI-TOF mass spectral database for the rapid screening and characterisation of bacteria implicated in human infectious diseases

21 January 2018

1 reference

Comparison of seven techniques for typing international epidemic strains of Clostridium difficile: restriction endonuclease analysis, pulsed-field gel electrophoresis, PCR-ribotyping, multilocus sequence typing, multilocus variable-number tandem-rep

21 January 2018

1 reference

Identification of archaea and some extremophilic bacteria using matrix-assisted laser desorption/ionization time-of-flight (MALDI-TOF) mass spectrometry

21 January 2018

1 reference

Characterization of a Yersinia enterocolitica biotype 1A strain harbouring an ail gene

21 January 2018

1 reference

MALDI-ToF mass spectrometry-multivariate data analysis as a tool for classification of reactivation and non-culturable states of bacteria

21 January 2018

1 reference

Identification of Streptococcus agalactiae isolates from various phylogenetic lineages by matrix-assisted laser desorption ionization-time of flight mass spectrometry

21 January 2018

1 reference

Characterization of Yersinia using MALDI-TOF mass spectrometry and chemometrics

21 January 2018

1 reference

Novel mass spectrometry-based tool for genotypic identification of mycobacteria

21 January 2018

1 reference

Difference and consensus of whole cell Salmonella enterica subsp. enterica serovars matrix-assisted laser desorption/ionization time-of-flight mass spectrometry spectra

21 January 2018

1 reference

Universal sample preparation method for characterization of bacteria by matrix-assisted laser desorption ionization-time of flight mass spectrometry

21 January 2018

1 reference

Discrimination of Francisella tularensis subspecies using surface enhanced laser desorption ionization mass spectrometry and multivariate data analysis

21 January 2018

1 reference

Identification of Enterobacteriaceae bacteria by direct matrix-assisted laser desorptiom/ionization mass spectrometric analysis of whole cells

21 January 2018

1 reference

Detection of bacteria from biological mixtures using immunomagnetic separation combined with matrix-assisted laser desorption/ionization time-of-flight mass spectrometry

21 January 2018

1 reference

Detection of Escherichia coli using immunomagnetic separation and bacteriophage amplification coupled with matrix-assisted laser desorption/ionization time-of-flight mass spectrometry

21 January 2018

1 reference

The discriminatory power of MALDI-TOF mass spectrometry to differentiate between isogenic teicoplanin-susceptible and teicoplanin-resistant strains of methicillin-resistant Staphylococcus aureus

21 January 2018

1 reference

Speciation of Campylobacter coli, C. jejuni, C. helveticus, C. lari, C. sputorum, and C. upsaliensis by matrix-assisted laser desorption ionization-time of flight mass spectrometry

21 January 2018

1 reference

Matrix-assisted laser desorption ionization-time of flight mass spectrometry for fast and reliable identification of clinical yeast isolates

21 January 2018

1 reference

Evaluation of matrix-assisted laser desorption ionization-time-of-flight mass spectrometry in comparison to 16S rRNA gene sequencing for species identification of nonfermenting bacteria

21 January 2018

1 reference

High interlaboratory reproducibility of matrix-assisted laser desorption ionization-time of flight mass spectrometry-based species identification of nonfermenting bacteria.

21 January 2018

1 reference

Sequence tag identification of intact proteins by matching tanden mass spectral data against sequence data bases

21 January 2018

1 reference

MALDI-TOF mass spectrometry as a tool for differentiation of invasive and noninvasive Streptococcus pyogenes isolates

21 January 2018

1 reference

Correlation between diverse cyclic lipopeptides production and regulation of growth and substrate utilization by Bacillus subtilis strains in a particular habitat

21 January 2018

1 reference

A comprehensive evaluation of colonic mucosal isolates of Sutterella wadsworthensis from inflammatory bowel disease

21 January 2018

1 reference

Evaluation of matrix-assisted laser desorption ionization-time of flight whole cell profiles for assessing the cultivable diversity of aerobic and moderately halophilic prokaryotes thriving in solar saltern sediments.

21 January 2018

1 reference

Matrix-assisted laser desorption ionization time-of-flight mass spectrometry: usefulness for taxonomy and epidemiology

21 January 2018

1 reference

Fingerprinting of Helicobacter pylori strains by matrix-assisted laser desorption/ionization mass spectrometric analysis

21 January 2018

1 reference

Immunomagnetic isolation of enterohemorrhagic Escherichia coli O157:H7 from ground beef and identification by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry and database searches

21 January 2018

1 reference

A quick and easy method to identify bacteria by matrix-assisted laser desorption/ionisation time-of-flight mass spectrometry

21 January 2018

1 reference

A novel approach to identify plant parasitic nematodes using matrix-assisted laser desorption/ionization time-of-flight mass spectrometry

21 January 2018

1 reference

Strain and phase identification of the U.S. category B agent Coxiella burnetii by matrix assisted laser desorption/ionization time-of-flight mass spectrometry and multivariate pattern recognition

21 January 2018

1 reference

Mass spectrometric analysis of lipopeptides from Bacillus strains isolated from diverse geographical locations.

21 January 2018

1 reference

High throughput identification of clinical isolates of Staphylococcus aureus using MALDI-TOF-MS of intact cells

21 January 2018

1 reference

Application of whole-cell matrix-assisted laser desorption ionization-time of flight mass spectrometry for rapid identification and clustering analysis of pantoea species

21 January 2018

1 reference

Isolation and characterization of atypical Riemerella columbina strains from pigeons and their differentiation from Riemerella anatipestifer.

21 January 2018

1 reference

Rapid identification of environmental bacterial strains by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry

21 January 2018

1 reference

Differentiation of mutans streptococci by intact cell matrix-assisted laser desorption/ionization time-of-flight mass spectrometry

21 January 2018

1 reference

Characterization of the protein subset desorbed by MALDI from whole bacterial cells

21 January 2018

1 reference

Rapid characterization of spores of Bacillus cereus group bacteria by matrix-assisted laser desorption-ionization time-of-flight mass spectrometry

21 January 2018

1 reference

Ribosomal protein profiling by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry for phylogenety-based subspecies resolution of Bifidobacterium longum

21 January 2018

1 reference

Mass spectrometry tools for the classification and identification of bacteria

21 January 2018

1 reference

Classification and identification of bacteria by mass spectrometry and computational analysis

21 January 2018

1 reference

Rapid typing of Moraxella catarrhalis subpopulations based on outer membrane proteins using mass spectrometry

21 January 2018

1 reference

New approaches to identification of bacterial pathogens by surface enhanced laser desorption/ionization time of flight mass spectrometry in concert with artificial neural networks, with special reference to Neisseria gonorrhoeae.

21 January 2018

1 reference

Shotgun mass mapping of Lactobacillus species and subspecies from caries related isolates by MALDI-MS.

21 January 2018

1 reference

Automating data acquisition affects mass spectrum quality and reproducibility during bacterial profiling using an intact cell sample preparation method with matrix-assisted laser desorption/ionization time-of-flight mass spectrometry

21 January 2018

1 reference

Sample preparation methods for MALDI-MS profiling of bacteria

21 January 2018

1 reference

Optimized application of surface-enhanced laser desorption/ionization time-of-flight MS to differentiate Francisella tularensis at the level of subspecies and individual strains

21 January 2018

1 reference

Ongoing revolution in bacteriology: routine identification of bacteria by matrix-assisted laser desorption ionization time-of-flight mass spectrometry

21 January 2018

1 reference

Tracing the transition of methicillin resistance in sub-populations of Staphylococcus aureus, using SELDI-TOF Mass Spectrometry and Artificial Neural Network Analysis

21 January 2018

1 reference

Discrimination and characterization of environmental strains of Escherichia coli by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF-MS).

21 January 2018

1 reference

Grouping myxococci (Corallococcus) strains by Matrix-Assisted Laser Desorption Ionization Time-of-Flight (MALDI TOF) mass spectrometry: comparison with gene sequence phylogenies

21 January 2018

1 reference

Rapid genus- and species-specific identification of Cronobacter spp. by matrix-assisted laser desorption ionization-time of flight mass spectrometry

21 January 2018

1 reference

Rapid species specific identification and subtyping of Yersinia enterocolitica by MALDI-TOF mass spectrometry

21 January 2018

1 reference

Identification of marker proteins for Bacillus anthracis using MALDI-TOF MS and ion trap MS/MS after direct extraction or electrophoretic separation

21 January 2018

1 reference

Characterization of ribosomal proteins as biomarkers for matrix-assisted laser desorption/ionization mass spectral identification of Lactobacillus plantarum.

21 January 2018

1 reference

PulseNet: the molecular subtyping network for foodborne bacterial disease surveillance, United States

21 January 2018

1 reference

Comparison of a multiplexed MassARRAY system with real-time allele-specific PCR technology for genotyping of methicillin-resistant Staphylococcus aureus

21 January 2018

1 reference

Identification of molecularly defined Staphylococcus aureus strains using matrix-assisted laser desorption/ionization time of flight mass spectrometry and the Biotyper 2.0 database.

21 January 2018

1 reference

Current developments in SELDI affinity technology

21 January 2018

1 reference

Identification and typing of Lactococcus lactis by matrix-assisted laser desorption ionization-time of flight mass spectrometry

21 January 2018

1 reference

How to select and interpret molecular strain typing methods for epidemiological studies of bacterial infections: a review for healthcare epidemiologists. Molecular Typing Working Group of the Society for Healthcare Epidemiology of America

21 January 2018

1 reference

A simple intact protein analysis by MALDI-MS for characterization of ribosomal proteins of two genome-sequenced lactic acid bacteria and verification of their amino acid sequences

21 January 2018

1 reference

Phylogenetic classification of Pseudomonas putida strains by MALDI-MS using ribosomal subunit proteins as biomarkers.

21 January 2018

1 reference

Phylogenetic analysis of Rhodococcus erythropolis based on the variation of ribosomal proteins as observed by matrix-assisted laser desorption ionization-mass spectrometry without using genome information

21 January 2018

1 reference

Direct surface analysis of fungal species by matrix-assisted laser desorption/ionization mass spectrometry

21 January 2018

1 reference

High-throughput identification of bacteria and yeast by matrix-assisted laser desorption ionization-time of flight mass spectrometry in conventional medical microbiology laboratories

21 January 2018

1 reference

Matrix-assisted laser desorption ionisation-time-of of-flight mass spectrometry of intact cells allows rapid identification of Burkholderia cepacia complex

21 January 2018

1 reference

Optimization of MALDI-TOF MS for strain level differentiation of Arthrobacter isolates

21 January 2018

1 reference

Base-specific fragmentation of amplified 16S rRNA genes analyzed by mass spectrometry: a tool for rapid bacterial identification

21 January 2018

1 reference

Intact cell mass spectrometry (ICMS) used to type methicillin-resistant Staphylococcus aureus: media effects and inter-laboratory reproducibility

21 January 2018

1 reference

The characterization of micro-organisms by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry

21 January 2018

1 reference

Proteomics for routine identification of microorganisms

21 January 2018

1 reference

Identification of the corn pathogen Pantoea stewartii by mass spectrometry of whole-cell extracts and its detection with novel PCR primers.

21 January 2018

1 reference

Detection of tumor markers with ProteinChip technology

21 January 2018

1 reference

Experimental factors affecting the quality and reproducibility of MALDI TOF mass spectra obtained from whole bacteria cells

21 January 2018

1 reference

Differentiation of Streptococcus pneumoniae conjunctivitis outbreak isolates by matrix-assisted laser desorption ionization-time of flight mass spectrometry

21 January 2018

1 reference

MALDI-TOF MS fingerprinting allows for discrimination of major methicillin-resistant Staphylococcus aureus lineages

21 January 2018

1 reference

Top-down identification of protein biomarkers in bacteria with unsequenced genomes

21 January 2018

1 reference

Phyloproteomic classification of unsequenced organisms by top‐down identification of bacterial proteins using capLC‐MS/MS on an Orbitrap

21 January 2018

1 reference

Direct detection of fatty acid ethyl esters using low temperature plasma (LTP) ambient ionization mass spectrometry for rapid bacterial differentiation

21 January 2018

1 reference

Characterization of PCR Products from Bacilli Using Electrospray Ionization FTICR Mass Spectrometry

21 January 2018

1 reference

21 January 2018

Identifiers

DOI

10.1002/MAS.21359

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28 June 2017

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