(Q31128082)

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Characterization of the effect of sample quality on high density oligonucleotide microarray data using progressively degraded rat liver RNA.

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Europe PubMed Central

PMC publication ID

18 September 2017

Characterization of the effect of sample quality on high density oligonucleotide microarray data using progressively degraded rat liver RNA. (English)

1 reference

Europe PubMed Central

PMC publication ID

18 September 2017

4

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Yaron Turpaz

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Europe PubMed Central

PMC publication ID

18 September 2017

author name string

Karol L Thompson

1

1 reference

Europe PubMed Central

PMC publication ID

18 September 2017

P Scott Pine

2

1 reference

Europe PubMed Central

PMC publication ID

18 September 2017

Barry A Rosenzweig

3

1 reference

Europe PubMed Central

PMC publication ID

18 September 2017

Jacques Retief

5

1 reference

Europe PubMed Central

PMC publication ID

18 September 2017

publication date

13 September 2007

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Europe PubMed Central

PMC publication ID

18 September 2017

BMC Biotechnology

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Europe PubMed Central

PMC publication ID

18 September 2017

7

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Europe PubMed Central

PMC publication ID

18 September 2017

57

1 reference

Europe PubMed Central

PMC publication ID

18 September 2017

Assessment of the relationship between pre-chip and post-chip quality measures for Affymetrix GeneChip expression data

1 reference

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14 July 2018

Biologically relevant effects of mRNA amplification on gene expression profiles

1 reference

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14 July 2018

Analysis of Affymetrix GeneChip data using amplified RNA.

1 reference

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14 July 2018

The RIN: an RNA integrity number for assigning integrity values to RNA measurements

1 reference

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14 July 2018

Use of a mixed tissue RNA design for performance assessments on multiple microarray formats

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2082023

14 July 2018

Assessing quality of hybridized RNA in Affymetrix GeneChip experiments using mixed-effects models

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2082023

14 July 2018

Moderate degradation does not preclude microarray analysis of small amounts of RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2082023

14 July 2018

DAVID: Database for Annotation, Visualization, and Integrated Discovery

1 reference

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14 July 2018

Accurate and reproducible gene expression profiles from laser capture microdissection, transcript amplification, and high density oligonucleotide microarray analysis

1 reference

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14 July 2018

Changes in differential gene expression because of warm ischemia time of radical prostatectomy specimens.

1 reference

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14 July 2018

The cap-to-tail guide to mRNA turnover

1 reference

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14 July 2018

Egr-1, a master switch coordinating upregulation of divergent gene families underlying ischemic stress

1 reference

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14 July 2018

Ribonucleases from rat and bovine liver: purification, specificity and structural characterization

1 reference

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14 July 2018

AU-rich elements: characterization and importance in mRNA degradation

1 reference

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14 July 2018

Amplified RNA synthesized from limited quantities of heterogeneous cDNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2082023

14 July 2018

Impact of RNA degradation on gene expression profiles: assessment of different methods to reliably determine RNA quality.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2082023

25 November 2018

Differential modulation of gene expression among rat tissues with warm ischemia.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2082023

25 November 2018

Evaluation of quality-control criteria for microarray gene expression analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2082023

25 November 2018

Expression levels for many genes in human peripheral blood cells are highly sensitive to ex vivo incubation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2082023

25 November 2018

Comparison of different isolation techniques prior gene expression profiling of blood derived cells: impact on physiological responses, on overall expression and the role of different cell types.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2082023

25 November 2018

Degradation profile of mRNA in a dead rat body: basic semi-quantification study

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2082023

25 November 2018

Identifiers

10.1186/1472-6750-7-57

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Europe PubMed Central

PMC publication ID

18 September 2017

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24 November 2022

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PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

18 September 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

18 September 2017

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