(Q31151258)

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Acquisition of biologically relevant gene expression data by Affymetrix microarray analysis of archival formalin-fixed paraffin-embedded tumours

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18382428%20AND%20SRC:MED&resulttype=core&format=json

5 January 2020

Acquisition of biologically relevant gene expression data by Affymetrix microarray analysis of archival formalin-fixed paraffin-embedded tumours (English)

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5 January 2020

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5 January 2020

Maria Jeziorska

4

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5 January 2020

Crispin J. Miller

9

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5 January 2020

11

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5 January 2020

Anthony J. Freemont

12

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5 January 2020

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Y Hey

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5 January 2020

E Saunders

3

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5 January 2020

J Denton

5

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5 January 2020

C L Wilson

6

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5 January 2020

R Swindell

7

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5 January 2020

S Dibben

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5 January 2020

S D Pepper

10

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5 January 2020

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1 April 2008

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5 January 2020

British Journal of Cancer

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5 January 2020

98

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5 January 2020

8

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5 January 2020

1403-1414

1 reference

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18382428%20AND%20SRC:MED&resulttype=core&format=json

5 January 2020

Determinants of RNA quality from FFPE samples

1 reference

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21 June 2018

Gene expression profiling from formalin-fixed paraffin-embedded tumors of pediatric glioblastoma

1 reference

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21 June 2018

Successful application of microarray technology to microdissected formalin-fixed, paraffin-embedded tissue

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2361698

21 June 2018

Preliminary comparison of quantity, quality, and microarray performance of RNA extracted from formalin-fixed, paraffin-embedded, and unfixed frozen tissue samples

1 reference

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21 June 2018

The neurotrophic receptor TrkB: a drug target in anti-cancer therapy?

1 reference

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21 June 2018

Large scale real-time PCR validation on gene expression measurements from two commercial long-oligonucleotide microarrays

1 reference

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21 June 2018

Gene expression programs in response to hypoxia: cell type specificity and prognostic significance in human cancers

1 reference

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21 June 2018

Technology insight: Application of molecular techniques to formalin-fixed paraffin-embedded tissues from breast cancer

1 reference

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21 June 2018

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1 reference

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21 June 2018

Simpleaffy: a BioConductor package for Affymetrix Quality Control and data analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2361698

21 June 2018

Effects of RNA degradation on gene expression analysis of human postmortem tissues

1 reference

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21 June 2018

Cancer therapy: can the challenge be MET?

1 reference

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21 June 2018

c-Met as a target for human cancer and characterization of inhibitors for therapeutic intervention

1 reference

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21 June 2018

Tumor heterogeneity affects the precision of microarray analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2361698

21 June 2018

Gene expression profiling reveals sequential changes in gastric tubular adenoma and carcinoma in situ

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2361698

21 June 2018

Quantitative gene expression profiling in formalin-fixed, paraffin-embedded tissues using universal bead arrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2361698

21 June 2018

Bioconductor: open software development for computational biology and bioinformatics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2361698

21 June 2018

affy--analysis of Affymetrix GeneChip data at the probe level

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2361698

21 June 2018

Measurement of gene expression in archival paraffin-embedded tissues: development and performance of a 92-gene reverse transcriptase-polymerase chain reaction assay

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2361698

21 June 2018

A global test for groups of genes: testing association with a clinical outcome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2361698

21 June 2018

Moderate degradation does not preclude microarray analysis of small amounts of RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2361698

21 June 2018

Mutational analysis of the tyrosine kinome in colorectal cancers

1 reference

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21 June 2018

A new strategy to amplify degraded RNA from small tissue samples for microarray studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2361698

21 June 2018

Towards quantitative mRNA analysis in paraffin-embedded tissues using real-time reverse transcriptase-polymerase chain reaction: a methodological study on lymph nodes from melanoma patients

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2361698

21 June 2018

Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2361698

21 June 2018

Quantitative mRNA expression analysis from formalin-fixed, paraffin-embedded tissues using 5' nuclease quantitative reverse transcription-polymerase chain reaction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2361698

21 June 2018

Analysis of chemical modification of RNA from formalin-fixed samples and optimization of molecular biology applications for such samples

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2361698

21 June 2018

Coexpression of HGF and c-Met/HGF receptor in human bone and soft tissue tumors.

1 reference

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21 June 2018

The Met-HGF/SF autocrine signaling mechanism is involved in sarcomagenesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2361698

21 June 2018

Gene expression analysis by real-time reverse transcription polymerase chain reaction: influence of tissue handling.

1 reference

https://api.crossref.org/works/10.1038%2FSJ.BJC.6604316

21 January 2018

Neurotrophic receptor TrkB: Is it a predictor of poor prognosis for carcinoma patients?

1 reference

https://api.crossref.org/works/10.1038%2FSJ.BJC.6604316

21 January 2018

The neurotrophin receptor TrkB cooperates with c-Met in enhancing neuroblastoma invasiveness

1 reference

https://api.crossref.org/works/10.1038%2FSJ.BJC.6604316

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Robust estimators for expression analysis

1 reference

https://api.crossref.org/works/10.1038%2FSJ.BJC.6604316

21 January 2018

Nrf2, a multi-organ protector?

1 reference

https://api.crossref.org/works/10.1038%2FSJ.BJC.6604316

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Analysis of high density expression microarrays with signed-rank call algorithms

1 reference

https://api.crossref.org/works/10.1038%2FSJ.BJC.6604316

21 January 2018

Relation of a Hypoxia Metagene Derived from Head and Neck Cancer to Prognosis of Multiple Cancers

1 reference

https://api.crossref.org/works/10.1038%2FSJ.BJC.6604316

21 January 2018

RNA expression analysis of formalin-fixed paraffin-embedded tumors

1 reference

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On reporting fold differences

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31 October 2018

Impact of c-Met expression on angiogenesis in soft tissue sarcomas: correlation to microvessel-density

1 reference

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12 December 2020

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inferred from PubMed ID database lookup

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1 reference

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inferred from PubMed ID database lookup

Expression signatures that correlated with Gleason score and relapse in prostate cancer

1 reference

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inferred from PubMed ID database lookup

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1 reference

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

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10.1038/SJ.BJC.6604316

1 reference

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18382428%20AND%20SRC:MED&resulttype=core&format=json

5 January 2020

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1 reference

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24 November 2022

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5 January 2020

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Europe PubMed Central

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5 January 2020

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