(Q31155969)

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Cloning, expression, and biochemical characterization of 3-deoxy-D-manno-2-octulosonate-8-phosphate (KDO8P) synthase from the hyperthermophilic bacterium Aquifex pyrophilus

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Europe PubMed Central

PubMed publication ID

29 June 2017

Cloning, expression, and biochemical characterization of 3-deoxy-D-manno-2-octulosonate-8-phosphate (KDO8P) synthase from the hyperthermophilic bacterium Aquifex pyrophilus (English)

1 reference

Europe PubMed Central

PubMed publication ID

29 June 2017

Aquifex pyrophilus

object named as

Aquifex pyrophilus

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author name string

Smadar Shulami

1

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Europe PubMed Central

PubMed publication ID

29 June 2017

Orit Yaniv

2

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Europe PubMed Central

PubMed publication ID

29 June 2017

Emilia Rabkin

3

1 reference

Europe PubMed Central

PubMed publication ID

29 June 2017

Yuval Shoham

4

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Europe PubMed Central

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29 June 2017

Timor Baasov

5

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Europe PubMed Central

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29 June 2017

publication date

29 August 2003

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Europe PubMed Central

PubMed publication ID

29 June 2017

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Europe PubMed Central

PubMed publication ID

29 June 2017

7

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Europe PubMed Central

PubMed publication ID

29 June 2017

6

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Europe PubMed Central

PubMed publication ID

29 June 2017

471-481

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Europe PubMed Central

PubMed publication ID

29 June 2017

3-Deoxy-D-manno-octulosonate-8-phosphate synthase catalyzes the C-O bond cleavage of phosphoenolpyruvate

1 reference

https://pubmed.ncbi.nlm.nih.gov/12955602

12 December 2020

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Analysis of complete genomes suggests that many prokaryotes do not rely on hairpin formation in transcription termination

1 reference

https://pubmed.ncbi.nlm.nih.gov/12955602

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structures of Aquifex aeolicus KDO8P synthase in complex with R5P and PEP, and with a bisubstrate inhibitor: role of active site water in catalysis

1 reference

https://pubmed.ncbi.nlm.nih.gov/12955602

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Catalytic mechanism of Kdo8P synthase: transient kinetic studies and evaluation of a putative reaction intermediate

1 reference

https://pubmed.ncbi.nlm.nih.gov/12955602

12 December 2020

based on heuristic

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[NiFe] hydrogenases from the hyperthermophilic bacterium Aquifex aeolicus: properties, function, and phylogenetics.

1 reference

https://pubmed.ncbi.nlm.nih.gov/12955602

12 December 2020

based on heuristic

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Characterization of a novel lipid A containing D-galacturonic acid that replaces phosphate residues. The structure of the lipid a of the lipopolysaccharide from the hyperthermophilic bacterium Aquifex pyrophilus

1 reference

https://pubmed.ncbi.nlm.nih.gov/12955602

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Functional and biochemical characterization of a recombinant 3-Deoxy-D-manno-octulosonic acid 8-phosphate synthase from the hyperthermophilic bacterium Aquifex aeolicus

1 reference

https://pubmed.ncbi.nlm.nih.gov/12955602

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Stereochemistry of 3-deoxyoctulosonate 8-phosphate synthase

1 reference

https://pubmed.ncbi.nlm.nih.gov/12955602

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Function of His185 in Aquifex aeolicus 3-deoxy-D-manno-octulosonate 8-phosphate synthase

1 reference

https://pubmed.ncbi.nlm.nih.gov/12955602

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure and mechanism of 3-deoxy-D-manno-octulosonate 8-phosphate synthase

1 reference

https://pubmed.ncbi.nlm.nih.gov/12955602

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity

1 reference

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12 December 2020

based on heuristic

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3-Deoxy-D-manno-octulosonate-8-phosphate synthase from Escherichia coli. Model of binding of phosphoenolpyruvate and D-arabinose-5-phosphate

1 reference

https://pubmed.ncbi.nlm.nih.gov/12955602

12 December 2020

based on heuristic

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The sigma 70 family: sequence conservation and evolutionary relationships

1 reference

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Purification and characterization of 3-deoxy-D-manno-octulosonate 8-phosphate synthetase from Escherichia coli

1 reference

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12 December 2020

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Overproduction and one-step purification of Escherichia coli 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase and oxygen transfer studies during catalysis using isotopic-shifted heteronuclear NMR.

1 reference

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12 December 2020

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Ribosome-messenger recognition in the absence of the Shine-Dalgarno interactions.

1 reference

https://pubmed.ncbi.nlm.nih.gov/12955602

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A new class of synthetic antibacterials acting on lipopolysaccharide biosynthesis

1 reference

https://pubmed.ncbi.nlm.nih.gov/12955602

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The complete genome of the hyperthermophilic bacterium Aquifex aeolicus

1 reference

https://pubmed.ncbi.nlm.nih.gov/12955602

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genetics of lipopolysaccharide biosynthesis in enteric bacteria.

1 reference

https://pubmed.ncbi.nlm.nih.gov/12955602

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Antibacterial agents specifically inhibiting lipopolysaccharide synthesis

1 reference

https://pubmed.ncbi.nlm.nih.gov/12955602

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Basic local alignment search tool

1 reference

https://pubmed.ncbi.nlm.nih.gov/12955602

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Lipid A mutants of Salmonella typhimurium. Characterization of a conditional lethal mutant in 3-deoxy-D-mannooctulosonate-8-phosphate synthetase

1 reference

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A phylogenetic analysis of Aquifex pyrophilus

1 reference

https://pubmed.ncbi.nlm.nih.gov/12955602

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structural and mechanistic investigation of 3-deoxy-D-manno-octulosonate-8-phosphate synthase by solid-state REDOR NMR

1 reference

https://pubmed.ncbi.nlm.nih.gov/12955602

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Antibacterial activities and characterization of novel inhibitors of LpxC.

1 reference

https://pubmed.ncbi.nlm.nih.gov/12955602

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The correct phylogenetic relationship of KdsA (3-deoxy-d-manno-octulosonate 8-phosphate synthase) with one of two independently evolved classes of AroA (3-deoxy-d-arabino-heptulosonate 7-phosphate synthase).

1 reference

https://pubmed.ncbi.nlm.nih.gov/12955602

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A metal bridge between two enzyme families. 3-deoxy-D-manno-octulosonate-8-phosphate synthase from Aquifex aeolicus requires a divalent metal for activity

1 reference

https://pubmed.ncbi.nlm.nih.gov/12955602

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Discontinuous occurrence of the hsp70 (dnaK) gene among Archaea and sequence features of HSP70 suggest a novel outlook on phylogenies inferred from this protein.

1 reference

https://pubmed.ncbi.nlm.nih.gov/12955602

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Bacteria diversify through warfare

1 reference

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Towards the development of novel antibiotics: synthesis and evaluation of a mechanism-based inhibitor of Kdo8P synthase

1 reference

https://pubmed.ncbi.nlm.nih.gov/12955602

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Catalytic mechanism of 3-deoxy-D-manno-2-octulosonate-8-phosphate synthase. The use of synthetic analogues to probe the structure of the putative reaction intermediate

1 reference

https://pubmed.ncbi.nlm.nih.gov/12955602

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding

1 reference

https://pubmed.ncbi.nlm.nih.gov/12955602

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Helicobacter pylori 3-deoxy-D-manno-octulosonate-8-phosphate (KDO-8-P) synthase is a zinc-metalloenzyme

1 reference

https://pubmed.ncbi.nlm.nih.gov/12955602

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Aquifex aeolicus 3-deoxy-D-manno-2-octulosonic acid 8-phosphate synthase: a new class of KDO 8-P synthase?

1 reference

https://pubmed.ncbi.nlm.nih.gov/12955602

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Antibacterial agents that target lipid A biosynthesis in gram-negative bacteria. Inhibition of diverse UDP-3-O-(r-3-hydroxymyristoyl)-n-acetylglucosamine deacetylases by substrate analogs containing zinc binding motifs

1 reference

https://pubmed.ncbi.nlm.nih.gov/12955602

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Biosynthesis of lipid A. Enzymatic incorporation of 3-deoxy-D-mannooctulosonate into a precursor of lipid A in Salmonella typhimurium

1 reference

https://pubmed.ncbi.nlm.nih.gov/12955602

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Substrate and metal complexes of 3-deoxy-D-manno-octulosonate-8-phosphate synthase from Aquifex aeolicus at 1.9-A resolution. Implications for the condensation mechanism

1 reference

https://pubmed.ncbi.nlm.nih.gov/12955602

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Crystal structures of KDOP synthase in its binary complexes with the substrate phosphoenolpyruvate and with a mechanism-based inhibitor

1 reference

https://pubmed.ncbi.nlm.nih.gov/12955602

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1007/S00792-003-0346-3

1 reference

Europe PubMed Central

PubMed publication ID

29 June 2017

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PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

29 June 2017

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