(Q31157538)

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Performance evaluation of kits for bisulfite-conversion of DNA from tissues, cell lines, FFPE tissues, aspirates, lavages, effusions, plasma, serum, and urine.

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scholarly article

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24699908%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

Performance evaluation of kits for bisulfite-conversion of DNA from tissues, cell lines, FFPE tissues, aspirates, lavages, effusions, plasma, serum, and urine (English)

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24699908%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

6

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24699908%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

author name string

Emily Eva Holmes

1

1 reference

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12 March 2020

Maria Jung

2

1 reference

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24699908%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

Sebastian Meller

3

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24699908%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

Annette Leisse

4

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24699908%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

Verena Sailer

5

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12 March 2020

Martina Mengdehl

7

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12 March 2020

Leif-Alexander Garbe

8

1 reference

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24699908%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

Barbara Uhl

9

1 reference

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24699908%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

Glen Kristiansen

10

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12 March 2020

Dimo Dietrich

11

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12 March 2020

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3 April 2014

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12 March 2020

1 reference

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24699908%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

9

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24699908%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

4

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12 March 2020

e93933

1 reference

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24699908%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

copyright license

Creative Commons Attribution 4.0 International

3 April 2014

1 reference

April 2022 Public Data File from Crossref

copyright status

0 references

Diagnostic and prognostic value of SHOX2 and SEPT9 DNA methylation and cytology in benign, paramalignant and malignant pleural effusions

1 reference

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21 June 2018

Improved PCR performance using template DNA from formalin-fixed and paraffin-embedded tissues by overcoming PCR inhibition

1 reference

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21 June 2018

Interplay between the cancer genome and epigenome

1 reference

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21 June 2018

Prospective evaluation of methylated SEPT9 in plasma for detection of asymptomatic colorectal cancer

1 reference

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21 June 2018

Improved PCR amplification for molecular analysis using DNA from long-term preserved formalin-fixed, paraffin-embedded lung cancer tissue specimens

1 reference

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21 June 2018

Clinical utility of an epigenetic assay to detect occult prostate cancer in histopathologically negative biopsies: results of the MATLOC study

1 reference

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21 June 2018

Functions of DNA methylation: islands, start sites, gene bodies and beyond

1 reference

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21 June 2018

High quality DNA obtained with an automated DNA extraction method with 70+ year old formalin-fixed celloidin-embedded (FFCE) blocks from the indiana medical history museum.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3974851

21 June 2018

Influence of prolonged formalin fixation of tissue samples on the sensitivity of chromogenic in situ hybridization

1 reference

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21 June 2018

SHOX2 DNA methylation is a biomarker for the diagnosis of lung cancer based on bronchial aspirates

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3974851

21 June 2018

Multicentre validation study of nucleic acids extraction from FFPE tissues.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3974851

21 June 2018

Bisulfite sequencing of DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3974851

21 June 2018

Multicenter clinical validation of PITX2 methylation as a prostate specific antigen recurrence predictor in patients with post-radical prostatectomy prostate cancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3974851

21 June 2018

Direct detection of DNA methylation during single-molecule, real-time sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3974851

21 June 2018

Development of a diagnostic microarray assay to assess the risk of recurrence of prostate cancer based on PITX2 DNA methylation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3974851

21 June 2018

MGMT promoter methylation in malignant gliomas: ready for personalized medicine?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3974851

21 June 2018

Circulating methylated SEPT9 DNA in plasma is a biomarker for colorectal cancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3974851

21 June 2018

Errors in the bisulfite conversion of DNA: modulating inappropriate- and failed-conversion frequencies.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3974851

21 June 2018

The bisulfite genomic sequencing used in the analysis of epigenetic states, a technique in the emerging environmental genotoxicology research

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3974851

21 June 2018

High-speed conversion of cytosine to uracil in bisulfite genomic sequencing analysis of DNA methylation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3974851

21 June 2018

Methylation sequencing from limiting DNA: embryonic, fixed, and microdissected cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3974851

21 June 2018

Bisulfite genomic sequencing: systematic investigation of critical experimental parameters

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3974851

21 June 2018

Quantitation of genomic DNA in plasma and serum samples: higher concentrations of genomic DNA found in serum than in plasma

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3974851

21 June 2018

Inactivation of the DNA-repair gene MGMT and the clinical response of gliomas to alkylating agents

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3974851

21 June 2018

A genomic sequencing protocol that yields a positive display of 5-methylcytosine residues in individual DNA strands

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3974851

21 June 2018

Bisulfite modification for analysis of DNA methylation

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0093933

21 January 2018

SHOX2 DNA methylation is a tumour marker in pleural effusions.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3974851

31 October 2018

The conversion of protonated cytosine-SO3(-) to uracil-SO3(-): insights into the novel induced hydrolytic deamination through bisulfite catalysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3974851

31 October 2018

Development and clinical validation of a real-time PCR assay for PITX2 DNA methylation to predict prostate-specific antigen recurrence in prostate cancer patients following radical prostatectomy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3974851

31 October 2018

Performance evaluation of the DNA methylation biomarker SHOX2 for the aid in diagnosis of lung cancer based on the analysis of bronchial aspirates.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3974851

31 October 2018

DNA methylation of the PITX2 gene promoter region is a strong independent prognostic marker of biochemical recurrence in patients with prostate cancer after radical prostatectomy.

1 reference

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1 reference

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Bisulfite conversion of genomic DNA for methylation analysis: protocol simplification with higher recovery applicable to limited samples and increased throughput.

1 reference

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Use of magnetic beads for plasma cell-free DNA extraction: toward automation of plasma DNA analysis for molecular diagnostics.

1 reference

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Identification and resolution of artifacts in bisulfite sequencing.

1 reference

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31 October 2018

SHOX2 DNA Methylation Is a Biomarker for the Diagnosis of Lung Cancer in Plasma

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3974851

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Degradation of DNA by bisulfite treatment

1 reference

https://pubmed.ncbi.nlm.nih.gov/24699908

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Assessment of SHOX2 methylation in EBUS-TBNA specimen improves accuracy in lung cancer staging

1 reference

https://pubmed.ncbi.nlm.nih.gov/24699908

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A bisulfite method of 5-methylcytosine mapping that minimizes template degradation

1 reference

https://pubmed.ncbi.nlm.nih.gov/24699908

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Accelerated bisulfite-deamination of cytosine in the genomic sequencing procedure for DNA methylation analysis

1 reference

https://pubmed.ncbi.nlm.nih.gov/24699908

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1371/JOURNAL.PONE.0093933

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24699908%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

2014PLoSO...993933H

0 references

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24699908%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24699908%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

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