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Genome information management and integrated data analysis with HaloLex.
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scholarly article
1 reference
stated in
Europe PubMed Central
PMCID
2516542
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18592220%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 January 2020
title
Genome information management and integrated data analysis with HaloLex
(English)
1 reference
stated in
Europe PubMed Central
PMCID
2516542
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18592220%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 January 2020
main subject
data analysis
0 references
author
Markus Rampp
series ordinal
6
1 reference
stated in
Europe PubMed Central
PMCID
2516542
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18592220%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 January 2020
Friedhelm Pfeiffer
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1
1 reference
stated in
Europe PubMed Central
PMCID
2516542
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18592220%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 January 2020
Kathrin Klee
series ordinal
4
1 reference
stated in
Europe PubMed Central
PMCID
2516542
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18592220%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 January 2020
Dieter Oesterhelt
series ordinal
7
object named as
Dieter Oesterhelt
1 reference
stated in
Europe PubMed Central
PMCID
2516542
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18592220%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 January 2020
author name string
Alexander Broicher
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMCID
2516542
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18592220%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 January 2020
Thomas Gillich
series ordinal
3
1 reference
stated in
Europe PubMed Central
PMCID
2516542
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18592220%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 January 2020
José Mejía
series ordinal
5
1 reference
stated in
Europe PubMed Central
PMCID
2516542
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18592220%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 January 2020
publication date
1 July 2008
1 reference
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Europe PubMed Central
PMCID
2516542
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18592220%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 January 2020
published in
Archives of Microbiology
1 reference
stated in
Europe PubMed Central
PMCID
2516542
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18592220%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 January 2020
volume
190
1 reference
stated in
Europe PubMed Central
PMCID
2516542
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18592220%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 January 2020
page(s)
281-299
1 reference
stated in
Europe PubMed Central
PMCID
2516542
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18592220%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 January 2020
issue
3
1 reference
stated in
Europe PubMed Central
PMCID
2516542
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18592220%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 January 2020
exact match
https://scigraph.springernature.com/pub.10.1007/s00203-008-0389-z
0 references
cites work
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PubMed Central
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Evolution in the laboratory: The genome of Halobacterium salinarum strain R1 compared to that of strain NRC-1
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21 June 2018
Metabolism of halophilic archaea
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21 June 2018
Microarray analysis in the archaeon Halobacterium salinarum strain R1
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PubMed Central
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21 June 2018
The low molecular weight proteome of Halobacterium salinarum
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21 June 2018
PEDANT genome database: 10 years online
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21 June 2018
AGMIAL: implementing an annotation strategy for prokaryote genomes as a distributed system
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21 June 2018
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21 June 2018
The genome of the square archaeon Haloquadratum walsbyi : life at the limits of water activity
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21 June 2018
Quantitative profiling of the membrane proteome in a halophilic archaeon
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516542
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21 June 2018
The UCSC Archaeal Genome Browser
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516542
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21 June 2018
The integrated microbial genomes (IMG) system
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516542
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21 June 2018
SIMAP: the similarity matrix of proteins
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21 June 2018
Large-scale prokaryotic gene prediction and comparison to genome annotation
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516542
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21 June 2018
Living with two extremes: conclusions from the genome sequence of Natronomonas pharaonis
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516542
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21 June 2018
Analysis of the cytosolic proteome of Halobacterium salinarum and its implication for genome annotation.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516542
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21 June 2018
The membrane proteome of Halobacterium salinarum
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516542
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21 June 2018
Genome sequence of Haloarcula marismortui: a halophilic archaeon from the Dead Sea
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516542
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21 June 2018
A combined transmembrane topology and signal peptide prediction method
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516542
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21 June 2018
The iProClass integrated database for protein functional analysis
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516542
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21 June 2018
GenDB--an open source genome annotation system for prokaryote genomes
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516542
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21 June 2018
Heterogeneity of genome and proteome content in bacteria, archaea, and eukaryotes
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516542
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21 June 2018
Systems biology: a brief overview
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516542
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21 June 2018
Genome sequence of Halobacterium species NRC-1
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516542
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21 June 2018
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516542
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21 June 2018
The codon Adaptation Index--a measure of directional synonymous codon usage bias, and its potential applications
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516542
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21 June 2018
Origins of genes: "big bang" or continuous creation?
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516542
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21 June 2018
A small protein from the bop-brp intergenic region of Halobacterium salinarum contains a zinc finger motif and regulates bop and crtB1 transcription
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Crossref
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21 January 2018
Variations in the multiple tbp genes in different Halobacterium salinarum strains and their expression during growth
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516542
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31 October 2018
Characterization of a Haloferax volcanii member of the enolase superfamily: deletion mutant construction, expression analysis, and transcriptome comparison
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31 October 2018
Regulation of gvp genes encoding gas vesicle proteins in halophilic Archaea
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516542
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31 October 2018
Reconstruction, modeling & analysis of Halobacterium salinarum R-1 metabolism
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516542
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31 October 2018
Large-scale identification of N-terminal peptides in the halophilic archaea Halobacterium salinarum and Natronomonas pharaonis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516542
retrieved
31 October 2018
Genome-wide proteomics of Natronomonas pharaonis.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516542
retrieved
31 October 2018
Large-scale, multi-genome analysis of alternate open reading frames in bacteria and archaea.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516542
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31 October 2018
Web-accessible proteome databases for microbial research
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516542
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31 October 2018
Development of joint application strategies for two microbial gene finders.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516542
retrieved
31 October 2018
Adaptation of protein secretion to extremely high-salt conditions by extensive use of the twin-arginine translocation pathway
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516542
retrieved
31 October 2018
Archaeal N-terminal protein maturation commonly involves N-terminal acetylation: a large-scale proteomics survey
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/18592220
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Creating a bioinformatics nation
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/18592220
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1007/S00203-008-0389-Z
1 reference
stated in
Europe PubMed Central
PMCID
2516542
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18592220%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 January 2020
Dimensions Publication ID
1048068182
0 references
PMCID
2516542
1 reference
stated in
Europe PubMed Central
PMCID
2516542
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18592220%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 January 2020
PubMed ID
18592220
1 reference
stated in
Europe PubMed Central
PMCID
2516542
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18592220%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 January 2020
ResearchGate publication ID
5259673
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