(Q31165936)

23 September 2017

ExSPAnder: a universal repeat resolver for DNA fragment assembly (English)

1 reference

23 September 2017

9

Alla Lapidus

0 references

Anton Bankevich

Anton Bankevich

3

0 references

Anton Korobeynikov

Anton Korobeynikov

8

0 references

Alexey A. Gurevich

Alexey Gurevich

4

0 references

Pavel A. Pevzner

10

Pavel A Pevzner

1 reference

23 September 2017

Andrey D Prjibelski

1

1 reference

23 September 2017

Irina Vasilinetc

2

1 reference

23 September 2017

Tatiana Krivosheeva

5

1 reference

23 September 2017

Sergey Nurk

6

1 reference

23 September 2017

Son Pham

7

1 reference

23 September 2017

language of work or name

English

0 references

publication date

1 June 2014

1 reference

23 September 2017

1 reference

23 September 2017

30

1 reference

23 September 2017

12

1 reference

23 September 2017

i293-301

1 reference

Creative Commons Attribution-NonCommercial 3.0 Unported

23 September 2017

start time

3 October 2016

1 reference

April 2023 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Assembling single-cell genomes and mini-metagenomes from chimeric MDA products

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4058921

QUAST: quality assessment tool for genome assemblies

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4058921

Pathset graphs: a novel approach for comprehensive utilization of paired reads in genome assembly

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4058921

SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4058921

IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4058921

Fast gapped-read alignment with Bowtie 2

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4058921

How to apply de Bruijn graphs to genome assembly

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4058921

Paired de bruijn graphs: a novel approach for incorporating mate pair information into genome assemblers

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4058921

Efficient de novo assembly of single-cell bacterial genomes from short-read data sets

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4058921

Complete genome sequence of Brachybacterium faecium type strain (Schefferle 6-10).

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4058921

High-quality draft assemblies of mammalian genomes from massively parallel sequence data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4058921

Ray: simultaneous assembly of reads from a mix of high-throughput sequencing technologies

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4058921

De novo assembly of human genomes with massively parallel short read sequencing

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4058921

ABySS: a parallel assembler for short read sequence data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4058921

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4058921

ALLPATHS: de novo assembly of whole-genome shotgun microreads

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4058921

Complete genome sequence of USA300, an epidemic clone of community-acquired meticillin-resistant Staphylococcus aureus

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4058921

An Eulerian path approach to DNA fragment assembly

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4058921

SomaticSniper: identification of somatic point mutations in whole genome sequencing data

21 June 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU266

Dirichlet mixtures, the Dirichlet process, and the structure of protein space

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU266

Time-course network analysis reveals TNF-α can promote G1/S transition of cell cycle in vascular endothelial cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU266

Accuracy estimation and parameter advising for protein multiple sequence alignment.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU266

Telescoper: de novo assembly of highly repetitive regions

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4058921

10.1093/BIOINFORMATICS/BTU266

31 October 2018

Identifiers

DOI

1 reference

journals/bioinformatics/PrjibelskiVBGKNPKLP14

23 September 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

23 September 2017

PubMed publication ID

24931996

1 reference