(Q32124440)

6 July 2017

title

Exploration of partially unfolded states of human alpha-lactalbumin by molecular dynamics simulation (English)

1 reference

molecular dynamics simulation

6 July 2017

main subject

0 references

3

Dobson CM

1 reference

6 July 2017

1

Paci E

1 reference

6 July 2017

4

Karplus M

1 reference

6 July 2017

Smith LJ

2

1 reference

6 July 2017

language of work or name

English

0 references

publication date

1 February 2001

1 reference

Journal of Molecular Biology

6 July 2017

number of pages

19

1 reference

based on heuristic

inferred from page(s)

published in

1 reference

6 July 2017

volume

306

1 reference

6 July 2017

issue

2

1 reference

6 July 2017

page(s)

329-347

1 reference

describes a project that uses

6 July 2017

molecular dynamics simulation

1 reference

based on heuristic

inferred from title

cites work

Formation of a molten globule intermediate early in the kinetic folding pathway of apomyoglobin

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Structural and Dynamical Characterization of a Biologically Active Unfolded Fibronectin-Binding Protein fromStaphylococcusaureus†

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Comparison of the transient folding intermediates in lysozyme and alpha-lactalbumin

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Different subdomains are most protected from hydrogen exchange in the molten globule and native states of human alpha-lactalbumin

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Structural characterization of the molten globule of alpha-lactalbumin by solution X-ray scattering

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

"New view" of protein folding reconciled with the old through multiple unfolding simulations.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Alpha-Lactalbumin: compact state with fluctuating tertiary structure?

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Molecular characterization of alpha-lactalbumin folding variants that induce apoptosis in tumor cells

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Hydrogen exchange and protein folding.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

A simple model for calculating the kinetics of protein folding from three-dimensional structures

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

MOLMOL: a program for display and analysis of macromolecular structures

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Identification and characterization of the unfolding transition state of chymotrypsin inhibitor 2 by molecular dynamics simulations

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Probing protein structure by solvent perturbation of NMR spectra. Photochemically induced dynamic nuclear polarization and paramagnetic perturbation techniques applied to the study of the molten globule state of alpha-lactalbumin

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Neural networks for secondary structure and structural class predictions.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

A surprising simplicity to protein folding.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Canonical dynamics: Equilibrium phase-space distributions

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Forced unfolding of fibronectin type 3 modules: an analysis by biased molecular dynamics simulations

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Unfolding proteins by external forces and temperature: the importance of topology and energetics

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

The molten globule state of alpha-lactalbumin.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Detection of residue contacts in a protein folding intermediate

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Numerical integration of the cartesian equations of motion of a system with constraints: molecular dynamics of n-alkanes

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Hydration of denatured and molten globule proteins

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Side-chain conformational disorder in a molten globule: molecular dynamics simulations of the A-state of human alpha-lactalbumin

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

A residue-specific NMR view of the non-cooperative unfolding of a molten globule

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

A molecular dynamics method for simulations in the canonical ensemble

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Kinetic role of early intermediates in protein folding

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Multiple conformational states of proteins: a molecular dynamics analysis of myoglobin

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Polar hydrogen positions in proteins: Empirical energy placement and neutron diffraction comparison

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

The fundamentals of protein folding: bringing together theory and experiment

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Simplified proteins: minimalist solutions to the 'protein folding problem'.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Effective energy function for proteins in solution

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Following protein folding in real time using NMR spectroscopy

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Unfolding and refolding of the native structure of bovine pancreatic trypsin inhibitor studied by computer simulations.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Discrimination of the native from misfolded protein models with an energy function including implicit solvation

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Alpha-lactalbumin forms a compact molten globule in the absence of disulfide bonds.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Molecular dynamics simulations of human alpha-lactalbumin: changes to the structural and dynamical properties of the protein at low pH.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Study of the "molten globule" intermediate state in protein folding by a hydrophobic fluorescent probe

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Simulation of activation free energies in molecular systems

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Kinetics, thermodynamics and evolution of non-native interactions in a protein folding nucleus

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Transient non-native secondary structures during the refolding of alpha-lactalbumin detected by infrared spectroscopy

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Conformational transitions using molecular dynamics with minimum biasing.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Areas, volumes, packing and protein structure

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Local structural preferences in the alpha-lactalbumin molten globule.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Hydrophobic sequence minimization of the alpha-lactalbumin molten globule

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

The molten globule state as a clue for understanding the folding and cooperativity of globular-protein structure.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Structure and stability of the molten globule state of guinea-pig alpha-lactalbumin: a hydrogen exchange study

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

CHARMM: A program for macromolecular energy, minimization, and dynamics calculations

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Characterization of a partly folded protein by NMR methods: studies on the molten globule state of guinea pig alpha-lactalbumin

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

A theoretical search for folding/unfolding nuclei in three-dimensional protein structures

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Computational approaches to study protein unfolding: hen egg white lysozyme as a case study

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Designing conditions for in vitro formation of amyloid protofilaments and fibrils

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

First-principles calculation of the folding free energy of a three-helix bundle protein

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Stein and Moore Award address. The molten globule intermediate of apomyoglobin and the process of protein folding

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Structure and dynamics of the acid-denatured molten globule state of alpha-lactalbumin: a two-dimensional NMR study

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Rapid collapse and slow structural reorganisation during the refolding of bovine α-lactalbumin 1 1Edited by P. E. Wright

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Compact state of a protein molecule with pronounced small-scale mobility: bovine alpha-lactalbumin

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

The alternative conformations of amyloidogenic proteins and their multi-step assembly pathways

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

The native-like tertiary fold in molten globule alpha-lactalbumin appears to be controlled by a continuous phase transition

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

The 'molten globule' state is involved in the translocation of proteins across membranes?

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.2000.4337

Identifiers

DOI

10.1006/JMBI.2000.4337

1 reference

6 July 2017

1 reference