(Q33131300)

English

Genome analyses of the carboxydotrophic sulfate-reducers Desulfotomaculum nigrificans and Desulfotomaculum carboxydivorans and reclassification of Desulfotomaculum caboxydivorans as a later synonym of Desulfotomaculum nigrificans

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21 July 2017

Genome analyses of the carboxydotrophic sulfate-reducers Desulfotomaculum nigrificans and Desulfotomaculum carboxydivorans and reclassification of Desulfotomaculum caboxydivorans as a later synonym of Desulfotomaculum nigrificans (English)

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21 July 2017

Desulfotomaculum

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Jasper Koehorst

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Nikos C. Kyrpides

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Alla Lapidus

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Tanja Woyke

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Patrick S Chain

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Patrick Chain

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Peter J. Schaap

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Peter J Schaap

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Joana I Alves

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Diana Z Sousa

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Hans-Peter Klenk

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Hans Peter Klenk

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21 July 2017

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Manfred Rohde

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Gerard Muyzer

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Karen W Davenport

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Karen W Davenport

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Janine C Detter

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Janine C Detter

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Michael Visser

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Caroline M Plugge

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Caroline M Plugge

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Jan Kuever

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Sofiya N Parshina

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Sofiya N Parshina

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Alfons J M Stams

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Alexander Lebedinsky

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Alexander V Lebedinsky

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Petra Worm

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Lynne A. Goodwin

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Lynne A Goodwin

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author name string

Inês A C Pereira

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publication date

1 March 2014

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21 July 2017

Standards in genomic sciences

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21 July 2017

9

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655-675

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21 July 2017

https://scigraph.springernature.com/pub.10.4056/sigs.4718645

0 references

Complete genome sequence of the sulfate-reducing firmicute Desulfotomaculum ruminis type strain (DL(T))

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4149029

21 June 2018

Desulfotomaculum defluvii sp. nov., a sulfate-reducing bacterium isolated from the subsurface environment of a landfill

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4149029

21 June 2018

The Genomes OnLine Database (GOLD) v.4: status of genomic and metagenomic projects and their associated metadata

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4149029

21 June 2018

Evolution and classification of the CRISPR-Cas systems

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21 June 2018

Digital DNA-DNA hybridization for microbial species delineation by means of genome-to-genome sequence comparison

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4149029

21 June 2018

Complete genome sequence of Desulfotomaculum acetoxidans type strain (5575)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4149029

21 June 2018

The DOE-JGI Standard Operating Procedure for the Annotations of Microbial Genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4149029

21 June 2018

International Code of Nomenclature of Bacteria: Bacteriological Code, 1990 Revision

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4149029

21 June 2018

The genome of the Gram-positive metal- and sulfate-reducing bacterium Desulfotomaculum reducens strain MI-1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4149029

21 June 2018

Prodigal: prokaryotic gene recognition and translation initiation site identification

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4149029

21 June 2018

Shifting the genomic gold standard for the prokaryotic species definition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4149029

21 June 2018

Diversity and ecophysiological features of thermophilic carboxydotrophic anaerobes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4149029

21 June 2018

IMG ER: a system for microbial genome annotation expert review and curation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4149029

21 June 2018

Desulfotomaculum hydrothermale sp. nov., a thermophilic sulfate-reducing bacterium isolated from a terrestrial Tunisian hot spring

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4149029

21 June 2018

The minimum information about a genome sequence (MIGS) specification

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4149029

21 June 2018

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4149029

21 June 2018

Phylogeny of the alpha and beta subunits of the dissimilatory adenosine-5'-phosphosulfate (APS) reductase from sulfate-reducing prokaryotes--origin and evolution of the dissimilatory sulfate-reduction pathway

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4149029

21 June 2018

BLASTO: a tool for searching orthologous groups

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4149029

21 June 2018

Degradation of Glucose by Proliferating Cells of Desulfotomaculum nigrificans.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4149029

21 June 2018

Life in hot carbon monoxide: the complete genome sequence of Carboxydothermus hydrogenoformans Z-2901

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4149029

21 June 2018

Desulfotomaculum carboxydivorans sp. nov., a novel sulfate-reducing bacterium capable of growth at 100% CO.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4149029

21 June 2018

Energy-converting [NiFe] hydrogenases from archaea and extremophiles: ancestors of complex I.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4149029

21 June 2018

SULFATE-FREE GROWTH OF CLOSTRIDIUM NIGRIFICANS

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4149029

21 June 2018

Gene ontology: tool for the unification of biology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4149029

21 June 2018

Characterization of the region encoding the CO-induced hydrogenase of Rhodospirillum rubrum

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4149029

21 June 2018

Classification of the spore-forming sulfate-reducing bacteria

1 reference

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21 June 2018

Microbial ureases: significance, regulation, and molecular characterization

1 reference

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21 June 2018

Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya

1 reference

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21 June 2018

Proposals Concerning the Higher Taxa of Bacteria

1 reference

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21 January 2018

List of new names and new combinations previously effectively, but not validly, published

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.4718645

21 January 2018

Approved Lists of Bacterial Names

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.4718645

21 January 2018

Peptococcaceae, a New Family To Include the Gram-Positive, Anaerobic Cocci of the Genera Peptococcus, Peptostreptococcus, and Ruminococcus

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.4718645

21 January 2018

GenePRIMP: a gene prediction improvement pipeline for prokaryotic genomes

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.4718645

21 January 2018

Carbon isotope fractionation by sulfate-reducing bacteria using different pathways for the oxidation of acetate

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.4718645

21 January 2018

Description of Two New Thermophilic Desulfotomaculum spp., Desulfotomaculum putei sp. nov., from a Deep Terrestrial Subsurface, and Desulfotomaculum luciae sp. nov., from a Hot Spring

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.4718645

21 January 2018

Fumarate respiration of Wolinella succinogenes: enzymology, energetics and coupling mechanism

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.4718645

21 January 2018

Report of the Ad Hoc Committee on Reconciliation of Approaches to Bacterial Systematics

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.4718645

21 January 2018

List of new names and new combinations previously effectively, but not validly, published

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4149029

31 October 2018

Purification and catalytic properties of Ech hydrogenase from Methanosarcina barkeri

1 reference

https://pubmed.ncbi.nlm.nih.gov/25197452

12 December 2020

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10.4056/SIGS.4718645

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Europe PubMed Central

PubMed publication ID

21 July 2017

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Europe PubMed Central

PubMed publication ID

21 July 2017

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21 July 2017

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