(Q33196256)

23 July 2017

The power and the limitations of cross-species protein identification by mass spectrometry-driven sequence similarity searches (English)

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23 July 2017

1

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23 July 2017

Jeffrey Oegema

2

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23 July 2017

Shamil Sunyaev

series ordinal

3

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23 July 2017

Andrej Shevchenko

series ordinal

4

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23 July 2017

26 December 2003

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Molecular & Cellular Proteomics

23 July 2017

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23 July 2017

3

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23 July 2017

238-249

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23 July 2017

3

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describes a project that uses

23 July 2017

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Advances in proteome analysis by mass spectrometry

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https://api.crossref.org/works/10.1074%2FMCP.M300073-MCP200

Analysis of proteins and proteomes by mass spectrometry

21 January 2018

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https://api.crossref.org/works/10.1074%2FMCP.M300073-MCP200

Mass spectrometry-based proteomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300073-MCP200

Identifying the proteome: software tools

21 January 2018

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https://api.crossref.org/works/10.1074%2FMCP.M300073-MCP200

Role of accurate mass measurement (+/- 10 ppm) in protein identification strategies employing MS or MS/MS and database searching.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300073-MCP200

Expanding the organismal scope of proteomics: cross-species protein identification by mass spectrometry and its implications

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300073-MCP200

Thrombomucin, a novel cell surface protein that defines thrombocytes and multipotent hematopoietic progenitors

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300073-MCP200

Reverse transcriptase motifs in the catalytic subunit of telomerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300073-MCP200

Spindle checkpoint protein Xmad1 recruits Xmad2 to unattached kinetochores

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300073-MCP200

Euplotes telomerase contains an La motif protein produced by apparent translational frameshifting

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300073-MCP200

Implementation and uses of automated de novo peptide sequencing by tandem mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300073-MCP200

Charting the proteomes of organisms with unsequenced genomes by MALDI-quadrupole time-of-flight mass spectrometry and BLAST homology searching

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300073-MCP200

Functional assignment of the 20 S proteasome from Trypanosoma brucei using mass spectrometry and new bioinformatics approaches.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300073-MCP200

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300073-MCP200

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300073-MCP200

Improved tools for biological sequence comparison

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300073-MCP200

Local alignment statistics

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300073-MCP200

Comparison of DNA sequences with protein sequences.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300073-MCP200

Efficiency of database search for identification of mutated and modified proteins via mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300073-MCP200

A novel MALDI LIFT-TOF/TOF mass spectrometer for proteomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300073-MCP200

Homology-based functional proteomics by mass spectrometry: application to the Xenopus microtubule-associated proteome

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300073-MCP200

Investigative proteomics: identification of an unknown plant virus from infected plants using mass spectrometry.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300073-MCP200

Analysis of compositionally biased regions in sequence databases

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300073-MCP200

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300073-MCP200

Comparative bioinformatic analysis of complete proteomes and protein parameters for cross-species identification in proteomics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300073-MCP200

Lineage-specific loss and divergence of functionally linked genes in eukaryotes

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300073-MCP200

Phylogenetic classification and the universal tree

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300073-MCP200

What does it mean to identify a protein in proteomics?

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300073-MCP200

A comparative analysis of an orthologous proteomic environment in the yeasts Saccharomyces cerevisiae and Schizosaccharomyces pombe

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300073-MCP200

Enzyme function less conserved than anticipated.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300073-MCP200

Peptide and protein de novo sequencing by mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300073-MCP200

High-Mass-Measurement Accuracy and 100 Sequence Coverage of Enzymatically Digested Bovine Serum Albumin from an ESI-FTICR Mass Spectrum

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300073-MCP200

"De novo" sequencing of peptides recovered from in-gel digested proteins by nanoelectrospray tandem mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M300073-MCP200

10.1074/MCP.M300073-MCP200

21 January 2018

Identifiers

DOI

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23 July 2017

1 reference