(Q33237369)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16556303%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

title

AltTrans: transcript pattern variants annotated for both alternative splicing and alternative polyadenylation (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16556303%20AND%20SRC:MED&resulttype=core&format=json

alternative mRNA splicing, via spliceosome

18 January 2020

main subject

1 reference

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16556303%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

author name string

Vincent Le Texier

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16556303%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

Jean-Jack Riethoven

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16556303%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

Vasudev Kumanduri

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16556303%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

Chellappa Gopalakrishnan

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16556303%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

Fabrice Lopez

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16556303%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

Thangavel Alphonse Thanaraj

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16556303%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

publication date

23 March 2006

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16556303%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16556303%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

volume

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16556303%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

page(s)

169

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16556303%20AND%20SRC:MED&resulttype=core&format=json

https://scigraph.springernature.com/pub.10.1186/1471-2105-7-169

18 January 2020

exact match

0 references

cites work

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1 reference

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Genome-wide assembly and analysis of alternative transcripts in mouse

21 June 2018

1 reference

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Computational analysis of 3'-ends of ESTs shows four classes of alternative polyadenylation in human, mouse, and rat

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1435940

A large-scale analysis of mRNA polyadenylation of human and mouse genes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1435940

SpliceInfo: an information repository for mRNA alternative splicing in human genome

21 June 2018

1 reference

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ECgene: genome annotation for alternative splicing

21 June 2018

1 reference

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21 June 2018

1 reference

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The EMBL Nucleotide Sequence Database

21 June 2018

1 reference

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The Universal Protein Resource (UniProt)

21 June 2018

1 reference

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PolyA_DB: a database for mammalian mRNA polyadenylation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1435940

Pre-mRNA splicing: life at the centre of the central dogma

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1435940

Multiple links between transcription and splicing

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1435940

The Alternative Splicing Gallery (ASG): bridging the gap between genome and transcriptome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1435940

A probabilistic model of 3' end formation in Caenorhabditis elegans

21 June 2018

1 reference

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BLAST: at the core of a powerful and diverse set of sequence analysis tools

21 June 2018

1 reference

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Genome wide identification and classification of alternative splicing based on EST data

21 June 2018

1 reference

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Integrative annotation of 21,037 human genes validated by full-length cDNA clones

21 June 2018

1 reference

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Genome-wide survey of human alternative pre-mRNA splicing with exon junction microarrays

21 June 2018

1 reference

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The Eukaryotic Promoter Database EPD: the impact of in silico primer extension

21 June 2018

1 reference

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DBTSS, DataBase of Transcriptional Start Sites: progress report 2004.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1435940

EASED: Extended Alternatively Spliced EST Database

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1435940

ASD: the Alternative Splicing Database.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1435940

Complex controls: the role of alternative promoters in mammalian genomes

21 June 2018

1 reference

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PromoSer: A large-scale mammalian promoter and transcription start site identification service

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1435940

Impact of alternative initiation, splicing, and termination on the diversity of the mRNA transcripts encoded by the mouse transcriptome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1435940

Targeting a complex transcriptome: the construction of the mouse full-length cDNA encyclopedia

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1435940

Strange bedfellows: polyadenylation factors at the promoter

21 June 2018

1 reference

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Conservation of human alternative splice events in mouse

21 June 2018

1 reference

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ProSplicer: a database of putative alternative splicing information derived from protein, mRNA and expressed sequence tag sequence data

21 June 2018

1 reference

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Identification and functional analysis of human transcriptional promoters

21 June 2018

1 reference

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ASAP: the Alternative Splicing Annotation Project

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1435940

Prediction and statistical analysis of alternatively spliced exons

21 June 2018

1 reference

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On the importance of being co-transcriptional

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1435940

An extensive network of coupling among gene expression machines

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1435940

PALS db: Putative Alternative Splicing database

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1435940

Genew: the human gene nomenclature database

21 June 2018

1 reference

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Identification of alternate polyadenylation sites and analysis of their tissue distribution using EST data.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1435940

Gene structure prediction and alternative splicing analysis using genomically aligned ESTs

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1435940

Heterogeneity in polyadenylation cleavage sites in mammalian mRNA sequences: implications for SAGE analysis.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1435940

AsMamDB: an alternative splice database of mammals

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1435940

Alternative pre-mRNA splicing: the logic of combinatorial control

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1435940

ASDB: database of alternatively spliced genes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1435940

Functional association between promoter structure and transcript alternative splicing.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1435940

dbEST--database for "expressed sequence tags"

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1435940

A database designed to computationally aid an experimental approach to alternative splicing.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1435940

Categorization and characterization of transcript-confirmed constitutively and alternatively spliced introns and exons from human

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1435940

31 October 2018

Identifiers

DOI

10.1186/1471-2105-7-169

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16556303%20AND%20SRC:MED&resulttype=core&format=json

journals/bmcbi/TexierRKGLGT06

18 January 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16556303%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

1 reference