(Q33240919)

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Motion as a phenotype: the use of live-cell imaging and machine visual screening to characterize transcription-dependent chromosome dynamics

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scholarly article

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Europe PubMed Central

PubMed publication ID

24 July 2017

Motion as a phenotype: the use of live-cell imaging and machine visual screening to characterize transcription-dependent chromosome dynamics (English)

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Europe PubMed Central

PubMed publication ID

24 July 2017

3

object named as

Pamela A Silver

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Europe PubMed Central

PubMed publication ID

24 July 2017

author name string

David A Drubin

1

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Europe PubMed Central

PubMed publication ID

24 July 2017

Arman M Garakani

2

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Europe PubMed Central

PubMed publication ID

24 July 2017

publication date

24 April 2006

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Europe PubMed Central

PubMed publication ID

24 July 2017

BMC Cell Biology

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Europe PubMed Central

PubMed publication ID

24 July 2017

7

1 reference

Europe PubMed Central

PubMed publication ID

24 July 2017

19

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Europe PubMed Central

PubMed publication ID

24 July 2017

describes a project that uses

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Europe PubMed Central

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC1488840/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

Developmentally induced changes in transcriptional program alter spatial organization across chromosomes

1 reference

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21 June 2018

Stochasticity in gene expression: from theories to phenotypes

1 reference

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21 June 2018

A non-random walk through the genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1488840

21 June 2018

Reverse recruitment: the Nup84 nuclear pore subcomplex mediates Rap1/Gcr1/Gcr2 transcriptional activation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1488840

21 June 2018

1 reference

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21 June 2018

Chromatin organization in the mammalian nucleus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1488840

21 June 2018

Spatial positioning; a new dimension in genome function

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1488840

21 June 2018

Gene recruitment of the activated INO1 locus to the nuclear membrane

1 reference

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21 June 2018

Transcription-dependent spatial arrangements of CFTR and adjacent genes in human cell nuclei

1 reference

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Chromatin architecture of the human genome: gene-rich domains are enriched in open chromatin fibers

1 reference

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Optimized cassettes for fluorescent protein tagging in Saccharomyces cerevisiae

1 reference

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21 June 2018

Genome-wide localization of the nuclear transport machinery couples transcriptional status and nuclear organization

1 reference

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21 June 2018

Sus1, a functional component of the SAGA histone acetylase complex and the nuclear pore-associated mRNA export machinery

1 reference

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21 June 2018

Global analysis of protein localization in budding yeast

1 reference

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21 June 2018

Sac3 is an mRNA export factor that localizes to cytoplasmic fibrils of nuclear pore complex

1 reference

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21 June 2018

The mRNA export machinery requires the novel Sac3p-Thp1p complex to dock at the nucleoplasmic entrance of the nuclear pores

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1488840

21 June 2018

Chromatin boundaries in budding yeast: the nuclear pore connection

1 reference

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21 June 2018

A monomeric red fluorescent protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1488840

21 June 2018

Nuclear architecture and spatial positioning help establish transcriptional states of telomeres in yeast.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1488840

21 June 2018

The S. cerevisiae SAGA complex functions in vivo as a coactivator for transcriptional activation by Gal4.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1488840

21 June 2018

SAGA is an essential in vivo target of the yeast acidic activator Gal4p

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1488840

21 June 2018

The positioning and dynamics of origins of replication in the budding yeast nucleus.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1488840

21 June 2018

Genome-wide location and function of DNA binding proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1488840

21 June 2018

A computational analysis of whole-genome expression data reveals chromosomal domains of gene expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1488840

21 June 2018

SAC3 may link nuclear protein export to cell cycle progression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1488840

21 June 2018

Nuclear pore complexes in the organization of silent telomeric chromatin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1488840

21 June 2018

The Spt components of SAGA facilitate TBP binding to a promoter at a post-activator-binding step in vivo

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1488840

21 June 2018

Three new dominant drug resistance cassettes for gene disruption in Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1488840

21 June 2018

Nuclear compartments and gene regulation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1488840

21 June 2018

Functional organization of the yeast SAGA complex: distinct components involved in structural integrity, nucleosome acetylation, and TATA-binding protein interaction.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1488840

21 June 2018

Interphase chromosomes undergo constrained diffusional motion in living cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1488840

21 June 2018

Essential functional interactions of SAGA, a Saccharomyces cerevisiae complex of Spt, Ada, and Gcn5 proteins, with the Snf/Swi and Srb/mediator complexes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1488840

21 June 2018

GFP tagging of budding yeast chromosomes reveals that protein-protein interactions can mediate sister chromatid cohesion

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1488840

21 June 2018

In vivo localization of DNA sequences and visualization of large-scale chromatin organization using lac operator/repressor recognition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1488840

21 June 2018

The clustering of telomeres and colocalization with Rap1, Sir3, and Sir4 proteins in wild-type Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1488840

21 June 2018

Single particle tracking. Analysis of diffusion and flow in two-dimensional systems

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1488840

21 June 2018

New methods for automated phenotyping of complex cellular behaviors.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1488840

31 October 2018

Chromatin motion is constrained by association with nuclear compartments in human cells.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1488840

31 October 2018

Chromosome dynamics in the yeast interphase nucleus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1488840

31 October 2018

Multiple regimes of constrained chromosome motion are regulated in the interphase Drosophila nucleus.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1488840

31 October 2018

Perinuclear localization of chromatin facilitates transcriptional silencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1488840

31 October 2018

Mutation of yeast Ku genes disrupts the subnuclear organization of telomeres

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1488840

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Localization of yeast telomeres to the nuclear periphery is separable from transcriptional repression and telomere stability functions

1 reference

https://pubmed.ncbi.nlm.nih.gov/16635267

12 December 2020

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Identifiers

10.1186/1471-2121-7-19

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Europe PubMed Central

PubMed publication ID

24 July 2017

Dimensions Publication ID

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PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

24 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

24 July 2017

ResearchGate publication ID

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