(Q33254241)

24 July 2017

title

Modelling the network of cell cycle transcription factors in the yeast Saccharomyces cerevisiae (English)

1 reference

24 July 2017

main subject

Saccharomyces cerevisiae

0 references

Matteo Pellegrini

5

0 references

Niels Grønbech-Jensen

series ordinal

4

object named as

Niels Grønbech-Jensen

1 reference

24 July 2017

Shawn Cokus

1

1 reference

24 July 2017

Sherri Rose

series ordinal

2

1 reference

24 July 2017

David Haynor

series ordinal

3

1 reference

24 July 2017

language of work or name

1 reference

16 August 2006

1 reference

24 July 2017

1 reference

24 July 2017

volume

7

1 reference

24 July 2017

issue

1

1 reference

25 June 2019

page(s)

381

1 reference

Identification of transcription factor cooperativity via stochastic system model

24 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1570153

Genome-wide prediction and characterization of interactions between transcription factors in Saccharomyces cerevisiae

21 June 2018

1 reference

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Statistical methods for identifying yeast cell cycle transcription factors

21 June 2018

1 reference

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Cell cycle-dependent transcription in yeast: promoters, transcription factors, and transcriptomes

21 June 2018

1 reference

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Dynamic Complex Formation During the Yeast Cell Cycle

21 June 2018

1 reference

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Interacting models of cooperative gene regulation

21 June 2018

1 reference

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Genomic analysis of regulatory network dynamics reveals large topological changes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1570153

Transcriptional regulatory code of a eukaryotic genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1570153

Integrative analysis of cell cycle control in budding yeast

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1570153

Defining transcriptional networks through integrative modeling of mRNA expression and transcription factor binding data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1570153

Computational inference of transcriptional regulatory networks from expression profiling and transcription factor binding site identification

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1570153

Network component analysis: reconstruction of regulatory signals in biological systems

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1570153

Identifying cooperativity among transcription factors controlling the cell cycle in yeast

21 June 2018

1 reference

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REDUCE: An online tool for inferring cis-regulatory elements and transcriptional module activities from microarray data

21 June 2018

1 reference

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Module networks: identifying regulatory modules and their condition-specific regulators from gene expression data

21 June 2018

1 reference

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Integrating regulatory motif discovery and genome-wide expression analysis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1570153

Conserved homeodomain proteins interact with MADS box protein Mcm1 to restrict ECB-dependent transcription to the M/G1 phase of the cell cycle

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1570153

Transcriptional regulatory networks in Saccharomyces cerevisiae

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1570153

The genomics of yeast responses to environmental stress and starvation

21 June 2018

1 reference

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Deciphering gene expression regulatory networks.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1570153

Serial regulation of transcriptional regulators in the yeast cell cycle

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1570153

Identifying regulatory networks by combinatorial analysis of promoter elements

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1570153

Regulatory element detection using correlation with expression.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1570153

Dynamic modeling of gene expression data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1570153

Systematic determination of genetic network architecture

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1570153

Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1570153

A genome-wide transcriptional analysis of the mitotic cell cycle

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1570153

The DNA binding and oligomerization domain of MCM1 is sufficient for its interaction with other regulatory proteins

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1570153

Sugars and circadian regulation make major contributions to the global regulation of diurnal gene expression in Arabidopsis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1570153

Logic of the yeast metabolic cycle: temporal compartmentalization of cellular processes.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1570153

A stochastic differential equation model for quantifying transcriptional regulatory network in Saccharomyces cerevisiae

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1570153

Quantitative characterization of the transcriptional regulatory network in the yeast cell cycle

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16914048

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2105-7-381

1 reference

journals/bmcbi/CokusRHGP06

24 July 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

24 July 2017

1 reference