(Q33259835)

English

QualitySNP: a pipeline for detecting single nucleotide polymorphisms and insertions/deletions in EST data from diploid and polyploid species

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scholarly article

1 reference

Europe PubMed Central

24 July 2017

1 reference

Europe PubMed Central

QualitySNP: a pipeline for detecting single nucleotide polymorphisms and insertions/deletions in EST data from diploid and polyploid species (English)

1 reference

Europe PubMed Central

24 July 2017

single-nucleotide polymorphism

1 reference

based on heuristic

inferred from title

1 reference

based on heuristic

inferred from title

object named as

Ben Vosman

2

0 references

author name string

Jifeng Tang

1

1 reference

Europe PubMed Central

24 July 2017

Roeland E Voorrips

3

1 reference

Europe PubMed Central

24 July 2017

C Gerard van der Linden

4

1 reference

Europe PubMed Central

24 July 2017

Jack A M Leunissen

5

1 reference

Europe PubMed Central

24 July 2017

publication date

9 October 2006

1 reference

Europe PubMed Central

24 July 2017

BMC Bioinformatics

1 reference

Europe PubMed Central

24 July 2017

7

1 reference

Europe PubMed Central

24 July 2017

438

1 reference

Europe PubMed Central

24 July 2017

describes a project that uses

1 reference

Europe PubMed Central

26 June 2022

https://europepmc.org/article/PMC/PMC1618865

based on heuristic

inferred from PubMed Central ID database lookup

https://scigraph.springernature.com/pub.10.1186/1471-2105-7-438

0 references

Application of machine learning in SNP discovery

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1618865

14 July 2018

A method for finding single-nucleotide polymorphisms with allele frequencies in sequences of deep coverage

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1618865

14 July 2018

novoSNP, a novel computational tool for sequence variation discovery

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1618865

14 July 2018

Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1618865

14 July 2018

A comparison of sequence-based polymorphism and haplotype content in transcribed and anonymous regions of the barley genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1618865

14 July 2018

UniProt: the Universal Protein knowledgebase

1 reference

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14 July 2018

Snipping polymorphisms from large EST collections in barley (Hordeum vulgare L.).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1618865

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A double-screening method to identify reliable candidate non-synonymous SNPs from chicken EST data.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1618865

14 July 2018

Large-scale identification and analysis of genome-wide single-nucleotide polymorphisms for mapping in Arabidopsis thaliana

1 reference

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Mining for single nucleotide polymorphisms and insertions/deletions in maize expressed sequence tag data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1618865

14 July 2018

Redundancy based detection of sequence polymorphisms in expressed sequence tag data using autoSNP.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1618865

14 July 2018

ESTs as a source for sequence polymorphism discovery in sugarcane: example of the Adh genes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1618865

14 July 2018

Database resources of the National Center for Biotechnology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1618865

14 July 2018

The hidden duplication past of Arabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1618865

14 July 2018

Applications of single nucleotide polymorphisms in crop genetics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1618865

14 July 2018

Accessing genetic variation: genotyping single nucleotide polymorphisms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1618865

14 July 2018

Identification of candidate coding region single nucleotide polymorphisms in 165 human genes using assembled expressed sequence tags

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1618865

14 July 2018

CAP3: A DNA sequence assembly program

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1618865

14 July 2018

The essence of SNPs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1618865

14 July 2018

Reliable identification of large numbers of candidate SNPs from public EST data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1618865

14 July 2018

Mining SNPs from EST databases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1618865

14 July 2018

Base-calling of automated sequencer traces using phred. II. Error probabilities

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1618865

14 July 2018

Comparison of DNA sequences with protein sequences.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1618865

14 July 2018

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1618865

14 July 2018

Improved tools for biological sequence comparison

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1618865

14 July 2018

Automated SNP detection in expressed sequence tags: statistical considerations and application to maritime pine sequences.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1618865

31 October 2018

Evidence that rice and other cereals are ancient aneuploids

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1618865

31 October 2018

High-throughput identification, database storage and analysis of SNPs in EST sequences.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1618865

31 October 2018

A general approach to single-nucleotide polymorphism discovery.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1618865

31 October 2018

Using cDNA and genomic sequences as tools to develop SNP strategies in cassava (Manihot esculenta Crantz)

1 reference

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31 October 2018

First-generation SNP/InDel markers tagging loci for pathogen resistance in the potato genome

1 reference

https://pubmed.ncbi.nlm.nih.gov/17029635

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chicken single nucleotide polymorphism identification and selection for genetic mapping

1 reference

https://pubmed.ncbi.nlm.nih.gov/17029635

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mining single-nucleotide polymorphisms from hexaploid wheat ESTs

1 reference

https://pubmed.ncbi.nlm.nih.gov/17029635

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/1471-2105-7-438

1 reference

Europe PubMed Central

24 July 2017

DBLP publication ID

journals/bmcbi/TangVVLL06

1 reference

DBLP Dataset 2021-01-02

28 January 2021

Dimensions Publication ID

0 references

1 reference

Europe PubMed Central

24 July 2017

1 reference

Europe PubMed Central

24 July 2017

ResearchGate publication ID

0 references

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