(Q33260495)

24 July 2017

1 reference

title

REEF: searching REgionally Enriched Features in genomes (English)

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24 July 2017

3

Stefania Bortoluzzi

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24 July 2017

Alessandro Coppe

1

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24 July 2017

Gian Antonio Danieli

series ordinal

2

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24 July 2017

publication date

16 October 2006

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24 July 2017

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24 July 2017

volume

7

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24 July 2017

page(s)

453

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Chromosomal clustering of a human transcriptome reveals regulatory background

24 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1624853

Promoter features related to tissue specificity as measured by Shannon entropy

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1624853

Genome-wide transcriptome mapping analysis identifies organ-specific gene expression patterns along human chromosomes

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1624853

A gene atlas of the mouse and human protein-encoding transcriptomes

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1624853

Calculating the statistical significance of physical clusters of co-regulated genes in the genome: the role of chromatin in domain-wide gene regulation.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1624853

Inter-species differences of co-expression of neighboring genes in eukaryotic genomes

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1624853

The human transcriptome map reveals extremes in gene density, intron length, GC content, and repeat pattern for domains of highly and weakly expressed genes

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1624853

Statistical significance for genomewide studies

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1624853

Chromosomal clustering of muscle-expressed genes in Caenorhabditis elegans

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1624853

Evidence for large domains of similarly expressed genes in the Drosophila genome

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1624853

The human transcriptome map: clustering of highly expressed genes in chromosomal domains

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1624853

Clustered organization of reproductive genes in the C. elegans genome.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1624853

GeneAnnot: comprehensive two-way linking between oligonucleotide array probesets and GeneCards genes.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1624853

Combining DNA expression with positional information to detect functional silencing of chromosomal regions

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1624853

Genome-wide identification of chromosomal regions of increased tumor expression by transcriptome analysis

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1624853

Expression imbalance map: a new visualization method for detection of mRNA expression imbalance regions.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1624853

31 October 2018

Identifiers

DOI

10.1186/1471-2105-7-453

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24 July 2017

DBLP publication ID

journals/bmcbi/CoppeDB06

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DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

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24 July 2017

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