(Q33263258)

24 July 2017

title

Selection for unequal densities of sigma70 promoter-like signals in different regions of large bacterial genomes (English)

1 reference

24 July 2017

Enrique Morett

3

0 references

Julio Collado-Vides

object named as

Julio Collado-Vides

series ordinal

4

0 references

author name string

Araceli M Huerta

series ordinal

1

1 reference

24 July 2017

M Pilar Francino

series ordinal

2

1 reference

24 July 2017

publication date

12 September 2006

1 reference

24 July 2017

1 reference

24 July 2017

volume

2

1 reference

24 July 2017

issue

11

1 reference

24 July 2017

page(s)

e185

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Creative Commons CC0 License

24 July 2017

copyright license

start time

1 January 2006

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted, dedicated to the public domain by copyright holder

0 references

cites work

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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The sigma70 family of sigma factors

21 June 2018

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Acceleration of genomic evolution caused by enhanced mutation rate in endocellular symbionts.

21 June 2018

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21 June 2018

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Escherichia coli promoter opening and -10 recognition: mutational analysis of sigma70.

21 June 2018

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21 June 2018

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21 June 2018

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Leaf-specifically expressed genes for polypeptides destined for chloroplasts with domains of sigma70 factors of bacterial RNA polymerases in Arabidopsis thaliana

21 June 2018

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Non-canonical sequence elements in the promoter structure. Cluster analysis of promoters recognized by Escherichia coli RNA polymerase

21 June 2018

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The -45 region of the Escherichia coli lac promoter: CAP-dependent and CAP-independent transcription

21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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A mutant Escherichia coli sigma 70 subunit of RNA polymerase with altered promoter specificity

21 June 2018

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Changes in conserved region 2 of Escherichia coli sigma 70 affecting promoter recognition

21 June 2018

1 reference

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Control site location and transcriptional regulation in Escherichia coli

21 June 2018

1 reference

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Competing promoters in prokaryotic transcription

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635534

The sigma 70 family: sequence conservation and evolutionary relationships

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635534

The lactose operon-controlling elements: a complex paradigm

21 June 2018

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Regulation of open complex formation at the Escherichia coli galactose operon promoters. Simultaneous interaction of RNA polymerase, gal repressor and CAP/cAMP

21 June 2018

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The silencing of pseudogenes.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635534

The sigma 70 subunit of RNA polymerase induces lacUV5 promoter-proximal pausing of transcription

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635534

The sigma 70 subunit of RNA polymerase mediates a promoter-proximal pause at the lac promoter.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635534

Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635534

Gene expression level influences amino acid usage, but not codon usage, in the tsetse fly endosymbiont Wigglesworthia.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635534

Consequences of reductive evolution for gene expression in an obligate endosymbiont

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635534

The effects of selection against spurious transcription factor binding sites.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635534

Did the loss of sigma factors initiate pseudogene accumulation in M. leprae?

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635534

A powerful non-homology method for the prediction of operons in prokaryotes.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635534

An inventory of genes encoding RNA polymerase sigma factors in 31 completely sequenced eubacterial genomes.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635534

Rapid evolution of cis-regulatory sequences via local point mutations.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635534

Recognition of the -10 promoter sequence by a partial polypeptide of sigma70 in vitro

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17096598

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Information content and free energy in DNA--protein interactions

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17096598

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PGEN.0020185

1 reference

24 July 2017

1 reference

24 July 2017

1 reference