(Q33266723)

24 July 2017

title

First complete genome sequence of two Staphylococcus epidermidis bacteriophages (English)

1 reference

Staphylococcus epidermidis

24 July 2017

0 references

1 reference

object named as

Staphylococcus epidermidis

1 reference

inferred from title

whole genome sequencing

1 reference

Anu Daniel

1

1 reference

24 July 2017

Penelope E Bonnen

series ordinal

2

1 reference

24 July 2017

Vincent A Fischetti

series ordinal

3

1 reference

24 July 2017

language of work or name

English

0 references

publication date

15 December 2006

1 reference

24 July 2017

published in

Journal of Bacteriology

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24 July 2017

volume

189

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24 July 2017

issue

5

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24 July 2017

page(s)

2086-2100

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Comparative proteomic analysis between the invasive and commensal strains of Staphylococcus epidermidis

24 July 2017

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21 June 2018

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Insights on Evolution of Virulence and Resistance from the Complete Genome Analysis of an Early Methicillin-Resistant Staphylococcus aureus Strain and a Biofilm-Producing Methicillin-Resistant Staphylococcus epidermidis Strain

21 June 2018

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Factors characterizing Staphylococcus epidermidis invasiveness determined by comparative genomics

21 June 2018

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Two self-splicing group I introns interrupt two late transcribed genes of prolate-headed Lactobacillus delbrueckii phage JCL1032.

21 June 2018

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21 June 2018

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Lactobacillus plantarum bacteriophage LP65: a new member of the SPO1-like genus of the family Myoviridae

21 June 2018

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Genetic organization of the psbAD region in phages infecting marine Synechococcus strains

21 June 2018

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MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment

21 June 2018

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Genome of staphylococcal phage K: a new lineage of Myoviridae infecting gram-positive bacteria with a low G+C content.

21 June 2018

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Phage community dynamics in hot springs

21 June 2018

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Are viruses driving microbial diversification and diversity?

21 June 2018

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The refined structure of a protein catenane: the HK97 bacteriophage capsid at 3.44 A resolution

21 June 2018

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Lytic transglycosylases in macromolecular transport systems of Gram-negative bacteria

21 June 2018

1 reference

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Structure and morphogenesis of bacteriophage T4.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1855768

Genome and proteome of Listeria monocytogenes phage PSA: an unusual case for programmed + 1 translational frameshifting in structural protein synthesis

21 June 2018

1 reference

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Mfold web server for nucleic acid folding and hybridization prediction

21 June 2018

1 reference

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The nicking homing endonuclease I-BasI is encoded by a group I intron in the DNA polymerase gene of the Bacillus thuringiensis phage Bastille

21 June 2018

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The CHAP domain: a large family of amidases including GSP amidase and peptidoglycan hydrolases

21 June 2018

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Origins of highly mosaic mycobacteriophage genomes

21 June 2018

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21 June 2018

Global phage diversity

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Genomic analysis of uncultured marine viral communities

21 June 2018

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The Phage Proteomic Tree: a genome-based taxonomy for phage

21 June 2018

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Genomic analysis of Clostridium perfringens bacteriophage phi3626, which integrates into guaA and possibly affects sporulation

21 June 2018

1 reference

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Phage genomics: small is beautiful

21 June 2018

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Ribonucleotide reductase genes of Bacillus prophages: a refuge to introns and intein coding sequences

21 June 2018

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Comparative phage genomics and the evolution of Siphoviridae: insights from dairy phages

21 June 2018

1 reference

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Sequence of the genome of the temperate, serotype-converting, Pseudomonas aeruginosa bacteriophage D3

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1855768

The terminase enzyme from bacteriophage lambda: a DNA-packaging machine.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1855768

Virioplankton: Viruses in Aquatic Ecosystems

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1855768

Complete nucleotide sequence, molecular analysis and genome structure of bacteriophage A118 of Listeria monocytogenes: implications for phage evolution

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1855768

Widespread distribution of a group I intron and its three deletion derivatives in the lysin gene of Streptococcus thermophilus bacteriophages

21 June 2018

1 reference

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National Nosocomial Infections Surveillance (NNIS) System Report, Data Summary from January 1990-May 1999, issued June 1999. A report from the NNIS System

21 June 2018

1 reference

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21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1855768

Comparative genomics of Streptococcus thermophilus phage species supports a modular evolution theory

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1855768

Evidence for a holin-like protein gene fully embedded out of frame in the endolysin gene of Staphylococcus aureus bacteriophage 187.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1855768

Unexpected abundance of self-splicing introns in the genome of bacteriophage Twort: introns in multiple genes, a single gene with three introns, and exon skipping by group I ribozymes

21 June 2018

1 reference

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Coagulase-negative staphylococci: role as pathogens

21 June 2018

1 reference

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A hidden Markov model for predicting transmembrane helices in protein sequences

21 June 2018

1 reference

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GeneMark.hmm: new solutions for gene finding

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1855768

Comparison of the lysogeny modules from the temperate Streptococcus thermophilus bacteriophages TP-J34 and Sfi21: implications for the modular theory of phage evolution

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1855768

Analysis of the DNA sequence, gene expression, origin of replication and modular structure of the Lactococcus lactis lytic bacteriophage sk1.

21 June 2018

1 reference

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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

21 June 2018

1 reference

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Homing endonucleases: keeping the house in order

21 June 2018

1 reference

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Characterization of the lysogeny DNA module from the temperate Streptococcus thermophilus bacteriophage phi Sfi21.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1855768

Genome structure of the Lactobacillus temperate phage phi g1e: the whole genome sequence and the putative promoter/repressor system

21 June 2018

1 reference

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Inducible gene expression mediated by a repressor-operator system isolated from Lactococcus lactis bacteriophage r1t.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1855768

A dot-matrix program with dynamic threshold control suited for genomic DNA and protein sequence analysis

21 June 2018

1 reference

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The portal protein of bacteriophage SPP1: a DNA pump with 13-fold symmetry.

21 June 2018

1 reference

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Structure of viral connectors and their function in bacteriophage assembly and DNA packaging

21 June 2018

1 reference

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Virion positions and relationships of lactococcal temperate bacteriophage TP901-1 proteins

21 June 2018

1 reference

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The toxic shock syndrome exotoxin structural gene is not detectably transmitted by a prophage

21 June 2018

1 reference

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Structural conventions for group I introns

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1855768

Conserved sequences and structures of group I introns: building an active site for RNA catalysis--a review

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1855768

DNA packaging in dsDNA bacteriophages

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1855768

Modelling of the three-dimensional architecture of group I catalytic introns based on comparative sequence analysis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1855768

Basic local alignment search tool

21 June 2018

1 reference

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A maximum likelihood approach to the detection of selection from a phylogeny.

21 June 2018

1 reference

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Predicting coiled coils from protein sequences

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1855768

Activation of the catalytic core of a group I intron by a remote 3' splice junction

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1855768

Evaluation of a new bacteriophage set for typing of Staphylococcus epidermidis strains

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1855768

Phage typing of Staphylococcus epidermidis

21 June 2018

1 reference

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New Bacteriophages of Staphylococcus epidermidis

21 June 2018

1 reference

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Novel and deviant Walker A ATP-binding motifs in bacteriophage large terminase-DNA packaging proteins

21 June 2018

1 reference

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Genome-based analysis of virulence genes in a non-biofilm-forming Staphylococcus epidermidis strain (ATCC 12228).

31 October 2018

1 reference

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Community-acquired Staphylococcus aureus infections: Increasing virulence and emerging methicillin resistance in the new millennium

31 October 2018

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A group I intron in the terminase gene of Lactobacillus delbrueckii subsp. lactis phage LL-H.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1855768

Properties of a cryptic high-frequency transducing phage in Staphylococcus aureus

31 October 2018

1 reference

12 December 2020

Determination of bacteriophage λ tail length by a protein ruler

1 reference

12 December 2020

Mutational analysis of two structural genes of the temperate lactococcal bacteriophage TP901-1 involved in tail length determination and baseplate assembly

1 reference

12 December 2020

The large subunit of bacteriophage lambda's terminase plays a role in DNA translocation and packaging termination

1 reference

12 December 2020

The in vitro ATPases of bacteriophage lambda terminase and its large subunit, gene product A. The relationship with their DNA helicase and packaging activities

1 reference

12 December 2020

Penetration of the bacterial cell wall: a family of lytic transglycosylases in bacteriophages and conjugative plasmids

1 reference

12 December 2020

Identifiers

DOI

10.1128/JB.01637-06

1 reference

24 July 2017

1 reference

24 July 2017

1 reference