(Q33276950)

25 July 2017

title

An efficient grid layout algorithm for biological networks utilizing various biological attributes (English)

1 reference

25 July 2017

5

Satoru Miyano

1 reference

25 July 2017

Kaname Kojima

1

1 reference

25 July 2017

Masao Nagasaki

series ordinal

2

1 reference

25 July 2017

Euna Jeong

series ordinal

3

1 reference

25 July 2017

Mitsuru Kato

series ordinal

4

1 reference

25 July 2017

publication date

6 March 2007

1 reference

25 July 2017

1 reference

25 July 2017

volume

8

1 reference

25 July 2017

page(s)

76

1 reference

describes a project that uses

25 July 2017

Cytoscape

object named as

Cytoscape

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

exact match

https://scigraph.springernature.com/pub.10.1186/1471-2105-8-76

0 references

cites work

Automatic drawing of biological networks using cross cost and subcomponent data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1821340

A new dynamical layout algorithm for complex biochemical reaction networks

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1821340

CADLIVE dynamic simulator: direct link of biochemical networks to dynamic models

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1821340

Genomic Object Net: I. A platform for modelling and simulating biopathways.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1821340

Cytoscape: a software environment for integrated models of biomolecular interaction networks

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1821340

CADLIVE for constructing a large-scale biochemical network based on a simulation-directed notation and its application to yeast cell cycle.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1821340

PATIKA: an integrated visual environment for collaborative construction and analysis of cellular pathways

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1821340

Endothelial activation: intracellular signaling pathways

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1821340

A grid layout algorithm for automatic drawing of biochemical networks.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1821340

Genomic Object Net: II. Modelling biopathways by hybrid functional Petri net with extension.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1821340

Biopathways representation and simulation on hybrid functional Petri net.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1821340

BioMiner--modeling, analyzing, and visualizing biochemical pathways and networks.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1821340

A graph layout algorithm for drawing metabolic pathways.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1821340

Cell fate simulation model of gustatory neurons with MicroRNAs double-negative feedback loop by hybrid functional Petri net with extension

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17338825

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

PATIKAweb: a Web interface for analyzing biological pathways through advanced querying and visualization

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17338825

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2105-8-76

1 reference

journals/bmcbi/KojimaNJKM07

25 July 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

1015824570

0 references

Fatcat ID

release_mfisg4jqqravzlonbmmzgesvuq

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/mfisg4jqqravzlonbmmzgesvuq

mapped directly with Wikidata item

24 November 2022

based on heuristic

PMC publication ID

1821340

1 reference

25 July 2017

1 reference