(Q33280321)

English

Use of DNA melting simulation software for in silico diagnostic assay design: targeting regions with complex melting curves and confirmation by real-time PCR using intercalating dyes

scientific article

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scholarly article

1 reference

Europe PubMed Central

25 July 2017

Use of DNA melting simulation software for in silico diagnostic assay design: targeting regions with complex melting curves and confirmation by real-time PCR using intercalating dyes (English)

1 reference

Europe PubMed Central

25 July 2017

0 references

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simulation software

1 reference

based on heuristic

inferred from title

1 reference

based on heuristic

inferred from title

object named as

Paul T Monis

3

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Christopher P. Saint

object named as

Christopher P Saint

2

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author name string

John P Rasmussen

1

1 reference

Europe PubMed Central

25 July 2017

publication date

29 March 2007

1 reference

Europe PubMed Central

25 July 2017

BMC Bioinformatics

1 reference

Europe PubMed Central

25 July 2017

8

1 reference

Europe PubMed Central

25 July 2017

107

1 reference

Europe PubMed Central

25 July 2017

https://scigraph.springernature.com/pub.10.1186/1471-2105-8-107

0 references

Rapid, sensitive, and discriminating identification of Naegleria spp. by real-time PCR and melting-curve analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851973

21 June 2018

Real‐Time Polymerase Chain Reaction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851973

21 June 2018

Demonstration of preferential binding of SYBR Green I to specific DNA fragments in real-time multiplex PCR

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851973

21 June 2018

High-resolution genotyping by amplicon melting analysis using LCGreen

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851973

21 June 2018

Cell culture-Taqman PCR assay for evaluation of Cryptosporidium parvum disinfection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851973

21 June 2018

Differential expression of carcinoembryonic antigen (CEA) splice variants in whole blood of colon cancer patients and healthy volunteers: implication for the detection of circulating colon cancer cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851973

21 June 2018

A novel gene encoding amidinotransferase in the cylindrospermopsin producing cyanobacterium Aphanizomenon ovalisporum

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851973

21 June 2018

Identification of genes implicated in toxin production in the cyanobacterium Cylindrospermopsis raciborskii

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851973

21 June 2018

LightCycler multiplex PCR for the laboratory diagnosis of common viral infections of the central nervous system

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851973

21 June 2018

Molecular characterization of the toxic cyanobacterium Cylindrospermopsis raciborskii and design of a species-specific PCR.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851973

21 June 2018

Thermal stability of DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851973

21 June 2018

Product differentiation by analysis of DNA melting curves during the polymerase chain reaction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851973

21 June 2018

Thermal denaturation of double-stranded nucleic acids: prediction of temperatures critical for gradient gel electrophoresis and polymerase chain reaction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851973

21 June 2018

Recursion relation generation of probability profiles for specific-sequence macromolecules with long-range correlations.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851973

21 June 2018

An experimental model for internal denaturation of linear DNA molecules

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851973

21 June 2018

Detection of nucleic acid hybridization by nonradiative fluorescence resonance energy transfer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851973

21 June 2018

Theory of DNA melting curves

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851973

21 June 2018

Helicoidal transfer matrix model for inhomogeneous DNA melting.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851973

31 October 2018

Comparison of SYTO9 and SYBR Green I for real-time polymerase chain reaction and investigation of the effect of dye concentration on amplification and DNA melting curve analysis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851973

31 October 2018

Real-time multiplex SYBR green I-based PCR assay for simultaneous detection of Salmonella serovars and Listeria monocytogenes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851973

31 October 2018

Speed-up of DNA melting algorithm with complete nearest neighbor properties.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851973

31 October 2018

Rapid detection of Campylobacter jejuni in chicken rinse water by melting-peak analysis of amplicons in real-time polymerase chain reaction.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851973

31 October 2018

Melting curve analysis of feline calicivirus isolates detected by real-time reverse transcription PCR.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851973

31 October 2018

DNA melting in the presence of fluorescent intercalating oxazole yellow dyes measured with a gel-based assay

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851973

31 October 2018

Statistical mechanical simulation of polymeric DNA melting with MELTSIM.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851973

31 October 2018

Cooperative lengths of DNA during melting

1 reference

https://pubmed.ncbi.nlm.nih.gov/17391531

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Rapid differentiation of Old World Leishmania species by LightCycler polymerase chain reaction and melting curve analysis

1 reference

https://pubmed.ncbi.nlm.nih.gov/17391531

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Length and Statistical Weight of Bubbles in DNA Melting

1 reference

https://pubmed.ncbi.nlm.nih.gov/17391531

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Kinetics of the Helix—Coil Transition in Polyamino Acids

1 reference

https://pubmed.ncbi.nlm.nih.gov/17391531

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/1471-2105-8-107

1 reference

Europe PubMed Central

25 July 2017

DBLP publication ID

journals/bmcbi/RasmussenSM07

1 reference

DBLP Dataset 2021-01-02

28 January 2021

Dimensions Publication ID

0 references

1 reference

Europe PubMed Central

25 July 2017

1 reference

Europe PubMed Central

25 July 2017

ResearchGate publication ID

0 references

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