(Q33283454)

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Comparative sequence analysis of Solanum and Arabidopsis in a hot spot for pathogen resistance on potato chromosome V reveals a patchwork of conserved and rapidly evolving genome segments

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scholarly article

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Europe PubMed Central

PubMed publication ID

25 July 2017

Comparative sequence analysis of Solanum and Arabidopsis in a hot spot for pathogen resistance on potato chromosome V reveals a patchwork of conserved and rapidly evolving genome segments (English)

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Europe PubMed Central

PubMed publication ID

25 July 2017

rapid evolution

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inferred from title

Prisca Viehöver

3

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Prisca Viehöver

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Hirofumi Ishihara

object named as

Hirofumi Ishihara

4

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Bernd Weisshaar

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Bernd Weisshaar

9

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Heiko Schoof

8

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author name string

Agim Ballvora

1

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

Anika Jöcker

2

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

Prisca Viehöver

3

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

Jürgen Paal

5

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

Khalid Meksem

6

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

Rémy Bruggmann

7

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Europe PubMed Central

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25 July 2017

Christiane Gebhardt

10

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Europe PubMed Central

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25 July 2017

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2 May 2007

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Europe PubMed Central

PubMed publication ID

25 July 2017

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Europe PubMed Central

PubMed publication ID

25 July 2017

8

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

112

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

describes a project that uses

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MUMmer

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

https://scigraph.springernature.com/pub.10.1186/1471-2164-8-112

0 references

Host-microbe interactions: shaping the evolution of the plant immune response

1 reference

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21 June 2018

Sequence, annotation, and analysis of synteny between rice chromosome 3 and diverged grass species

1 reference

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21 June 2018

To clone or not to clone plant QTLs: present and future challenges

1 reference

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21 June 2018

The Arabidopsis F-box protein TIR1 is an auxin receptor

1 reference

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21 June 2018

Evolution of DNA sequence nonhomologies among maize inbreds

1 reference

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21 June 2018

The nematode-resistance gene, Mi-1, is associated with an inverted chromosomal segment in susceptible compared to resistant tomato.

1 reference

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21 June 2018

Plant immunity: the origami of receptor activation

1 reference

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21 June 2018

The genetic colinearity of rice and other cereals on the basis of genomic sequence analysis

1 reference

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21 June 2018

Comparison of genes among cereals

1 reference

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21 June 2018

Apollo: a sequence annotation editor

1 reference

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21 June 2018

Exploring plant genomes by RNA-induced gene silencing.

1 reference

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21 June 2018

Cold sweetening in diploid potato: mapping quantitative trait loci and candidate genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225836

21 June 2018

Intraspecific violation of genetic colinearity and its implications in maize

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225836

21 June 2018

Automatic clustering of orthologs and in-paralogs from pairwise species comparisons

1 reference

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21 June 2018

Resistance gene complexes: evolution and utilization

1 reference

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21 June 2018

Organization of genes controlling disease resistance in the potato genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225836

21 June 2018

InterProScan--an integration platform for the signature-recognition methods in InterPro

1 reference

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21 June 2018

Sequence and analysis of the tomato JOINTLESS locus

1 reference

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21 June 2018

Genome annotation: from sequence to biology

1 reference

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21 June 2018

Regulators of cell death in disease resistance

1 reference

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21 June 2018

InterPro--an integrated documentation resource for protein families, domains and functional sites

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225836

21 June 2018

Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225836

21 June 2018

Comparing sequenced segments of the tomato and Arabidopsis genomes: large-scale duplication followed by selective gene loss creates a network of synteny

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225836

21 June 2018

EMBOSS: the European Molecular Biology Open Software Suite

1 reference

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21 June 2018

Ab initio gene finding in Drosophila genomic DNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225836

21 June 2018

Agrobacterium transient expression system as a tool for the isolation of disease resistance genes: application to the Rx2 locus in potato.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225836

21 June 2018

The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225836

21 June 2018

GeneMark.hmm: new solutions for gene finding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225836

21 June 2018

A contiguous 60 kb genomic stretch from barley reveals molecular evidence for gene islands in a monocot genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225836

21 June 2018

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

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21 June 2018

Construction and characterization of a human bacterial artificial chromosome library

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225836

21 June 2018

A dot-matrix program with dynamic threshold control suited for genomic DNA and protein sequence analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225836

21 June 2018

Quantitative resistance to Phytophthora infestans in potato: a case study for QTL mapping in an allogamous plant species

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225836

21 June 2018

Localization by restriction fragment length polymorphism mapping in potato of a major dominant gene conferring resistance to the potato cyst nematode Globodera rostochiensis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225836

21 June 2018

RFLP mapping on potato chromosomes of two genes controlling extreme resistance to potato virus X (PVX).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225836

21 June 2018

High density molecular linkage maps of the tomato and potato genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225836

21 June 2018

The R1 gene conferring race-specific resistance to Phytophthora infestans in potato is located on potato chromosome V

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225836

21 June 2018

Quantitatively-inherited resistance toGlobodera pallida is dominated by one major locus inSolanum spegazzinii.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225836

31 October 2018

RFLP Maps Based on a Common Set of Clones Reveal Modes of Chromosomal Evolution in Potato and Tomato

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225836

31 October 2018

Plant genome archaeology: evidence for conserved ancestral chromosome segments in dicotyledonous plant species.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225836

31 October 2018

The R1 resistance gene cluster contains three groups of independently evolving, type I R1 homologues and shows substantial structural variation among haplotypes of Solanum demissum.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225836

31 October 2018

Comparative mapping between potato (Solanum tuberosum) and Arabidopsis thaliana reveals structurally conserved domains and ancient duplications in the potato genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225836

31 October 2018

Can the QTL for late blight resistance on potato chromosome 5 be attributed to foliage maturity type?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225836

31 October 2018

The R1 gene for potato resistance to late blight (Phytophthora infestans) belongs to the leucine zipper/NBS/LRR class of plant resistance genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225836

31 October 2018

Clusters of resistance genes in plants evolve by divergent selection and a birth-and-death process

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225836

31 October 2018

A high-resolution map of the vicinity of the R1 locus on chromosome V of potato based on RFLP and AFLP markers.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225836

31 October 2018

Recombination around the Tm2a and Mi resistance genes in different crosses of Lycopersicon peruvianum

1 reference

https://pubmed.ncbi.nlm.nih.gov/17474978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

RFLP analysis and linkage mapping in Solanum tuberosum

1 reference

https://pubmed.ncbi.nlm.nih.gov/17474978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparative Sequence Analysis Reveals Extensive Microcolinearity in the Lateral Suppressor Regions of the Tomato, Arabidopsis, and Capsella Genomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/17474978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/1471-2164-8-112

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Europe PubMed Central

PubMed publication ID

25 July 2017

Dimensions Publication ID

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PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

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