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BioPP: a tool for web-publication of biological networks
scientific article
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instance of
scholarly article
1 reference
stated in
Europe PubMed Central
PMCID
1885811
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17519033%20AND%20SRC:MED&resulttype=core&format=json
retrieved
31 December 2019
review article
1 reference
stated in
Europe PubMed Central
title
BioPP: a tool for web-publication of biological networks
(English)
1 reference
stated in
Europe PubMed Central
PMCID
1885811
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17519033%20AND%20SRC:MED&resulttype=core&format=json
retrieved
31 December 2019
author
Stuart C Sealfon
series ordinal
4
1 reference
stated in
Europe PubMed Central
PMCID
1885811
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17519033%20AND%20SRC:MED&resulttype=core&format=json
retrieved
31 December 2019
author name string
Ganesh A Viswanathan
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMCID
1885811
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17519033%20AND%20SRC:MED&resulttype=core&format=json
retrieved
31 December 2019
German Nudelman
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMCID
1885811
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17519033%20AND%20SRC:MED&resulttype=core&format=json
retrieved
31 December 2019
Sonali Patil
series ordinal
3
1 reference
stated in
Europe PubMed Central
PMCID
1885811
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17519033%20AND%20SRC:MED&resulttype=core&format=json
retrieved
31 December 2019
publication date
22 May 2007
1 reference
stated in
Europe PubMed Central
PMCID
1885811
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17519033%20AND%20SRC:MED&resulttype=core&format=json
retrieved
31 December 2019
published in
BMC Bioinformatics
1 reference
stated in
Europe PubMed Central
PMCID
1885811
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17519033%20AND%20SRC:MED&resulttype=core&format=json
retrieved
31 December 2019
volume
8
1 reference
stated in
Europe PubMed Central
PMCID
1885811
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17519033%20AND%20SRC:MED&resulttype=core&format=json
retrieved
31 December 2019
page(s)
168
1 reference
stated in
Europe PubMed Central
PMCID
1885811
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17519033%20AND%20SRC:MED&resulttype=core&format=json
retrieved
31 December 2019
describes a project that uses
Cytoscape
object named as
Cytoscape
1 reference
stated in
CZ Software Mentions: A large dataset of software mentions in the biomedical literature
exact match
https://scigraph.springernature.com/pub.10.1186/1471-2105-8-168
0 references
cites work
PANTHER version 6: protein sequence and function evolution data with expanded representation of biological pathways
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885811
retrieved
28 July 2018
cPath: open source software for collecting, storing, and querying biological pathways
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885811
retrieved
28 July 2018
Evolving a lingua franca and associated software infrastructure for computational systems biology: the Systems Biology Markup Language (SBML) project
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885811
retrieved
28 July 2018
A comprehensive map of the toll-like receptor signaling network
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885811
retrieved
28 July 2018
Escalating model sizes and complexities call for standardized forms of representation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885811
retrieved
28 July 2018
A comprehensive pathway map of epidermal growth factor receptor signaling
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885811
retrieved
28 July 2018
Text mining for metabolic pathways, signaling cascades, and protein networks
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885811
retrieved
28 July 2018
Reactome: a knowledgebase of biological pathways
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885811
retrieved
28 July 2018
Pathway databases
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885811
retrieved
28 July 2018
Next generation simulation tools: the Systems Biology Workbench and BioSPICE integration
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885811
retrieved
28 July 2018
Systems biology markup language: Level 2 and beyond
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885811
retrieved
28 July 2018
Cytoscape: a software environment for integrated models of biomolecular interaction networks
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885811
retrieved
28 July 2018
The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885811
retrieved
28 July 2018
A new approach to decoding life: systems biology
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885811
retrieved
28 July 2018
Supporting the SBML layout extension.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885811
retrieved
31 October 2018
The Genome Knowledgebase: a resource for biologists and bioinformaticists.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885811
retrieved
31 October 2018
Systems biology: a brief overview
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1885811
retrieved
31 October 2018
Using process diagrams for the graphical representation of biological networks
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/17519033
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Systems biology: understanding cells
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/17519033
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1186/1471-2105-8-168
1 reference
stated in
Europe PubMed Central
PMCID
1885811
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17519033%20AND%20SRC:MED&resulttype=core&format=json
retrieved
31 December 2019
DBLP publication ID
journals/bmcbi/ViswanathanNPS07
1 reference
stated in
DBLP Dataset 2021-01-02
retrieved
28 January 2021
Dimensions Publication ID
1050323953
0 references
PMCID
1885811
1 reference
stated in
Europe PubMed Central
PMCID
1885811
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17519033%20AND%20SRC:MED&resulttype=core&format=json
retrieved
31 December 2019
PubMed ID
17519033
1 reference
stated in
Europe PubMed Central
PMCID
1885811
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17519033%20AND%20SRC:MED&resulttype=core&format=json
retrieved
31 December 2019
ResearchGate publication ID
6313744
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