(Q33290217)

25 July 2017

title

Evidence of differential HLA class I-mediated viral evolution in functional and accessory/regulatory genes of HIV-1 (English)

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25 July 2017

4

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25 July 2017

Chanson J Brumme

2

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Zabrina L Brumme

Zabrina L Brumme

1

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Tanmoy Bhattacharya

Tanmoy Bhattacharya

8

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Christian Brander

Christian Brander

15

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Robert S Hogg

Robert S Hogg

12

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Bruce D. Walker

16

Bruce D Walker

1 reference

25 July 2017

13

Julio S G Montaner

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25 July 2017

3

David Heckerman

1 reference

25 July 2017

10

James Szinger

1 reference

25 July 2017

14

Nicole Frahm

1 reference

25 July 2017

9

Celia Chui

1 reference

25 July 2017

17

P Richard Harrigan

1 reference

25 July 2017

Marcus Daniels

5

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25 July 2017

Jonathan Carlson

6

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25 July 2017

Carl Kadie

7

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25 July 2017

Theresa Mo

11

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25 July 2017

language of work or name

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1 July 2007

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25 July 2017

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25 July 2017

volume

3

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25 July 2017

issue

7

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25 July 2017

page(s)

e94

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Creative Commons CC0 License

25 July 2017

copyright license

start time

6 July 2007

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted, dedicated to the public domain by copyright holder

0 references

cites work

Leveraging information across HLA alleles/supertypes improves epitope prediction

1 reference

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Evidence of Viral Adaptation to HLA Class I-Restricted Immune Pressure in Chronic Hepatitis C Virus Infection

21 June 2018

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Rapid reversion of sequence polymorphisms dominates early human immunodeficiency virus type 1 evolution

21 June 2018

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Maintenance of viral suppression in HIV-1-infected HLA-B*57+ elite suppressors despite CTL escape mutations

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1904471

Constraints on HIV-1 evolution and immunodominance revealed in monozygotic adult twins infected with the same virus

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1904471

Selective escape from CD8+ T-cell responses represents a major driving force of human immunodeficiency virus type 1 (HIV-1) sequence diversity and reveals constraints on HIV-1 evolution

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1904471

De novo generation of escape variant-specific CD8+ T-cell responses following cytotoxic T-lymphocyte escape in chronic human immunodeficiency virus type 1 infection

21 June 2018

1 reference

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CD8+ T cell epitope-flanking mutations disrupt proteasomal processing of HIV-1 Nef.

21 June 2018

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Transmission and accumulation of CTL escape variants drive negative associations between HIV polymorphisms and HLA.

21 June 2018

1 reference

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Immunologic pressure within class I-restricted cognate human immunodeficiency virus epitopes during highly active antiretroviral therapy

21 June 2018

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Determinants of human immunodeficiency virus type 1 escape from the primary CD8+ cytotoxic T lymphocyte response

21 June 2018

1 reference

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Immune escape precedes breakthrough human immunodeficiency virus type 1 viremia and broadening of the cytotoxic T-lymphocyte response in an HLA-B27-positive long-term-nonprogressing child

21 June 2018

1 reference

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Frequent transmission of cytotoxic-T-lymphocyte escape mutants of human immunodeficiency virus type 1 in the highly HLA-A24-positive Japanese population

21 June 2018

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Immune selection for altered antigen processing leads to cytotoxic T lymphocyte escape in chronic HIV-1 infection

21 June 2018

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Consistent cytotoxic-T-lymphocyte targeting of immunodominant regions in human immunodeficiency virus across multiple ethnicities

21 June 2018

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Impaired processing and presentation of cytotoxic-T-lymphocyte (CTL) epitopes are major escape mechanisms from CTL immune pressure in human immunodeficiency virus type 1 infection

21 June 2018

1 reference

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Statistical significance for genomewide studies

21 June 2018

1 reference

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Diversity considerations in HIV-1 vaccine selection

21 June 2018

1 reference

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The HLA system. First of two parts

21 June 2018

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SYFPEITHI: database for MHC ligands and peptide motifs

21 June 2018

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Positive selection of HIV-1 cytotoxic T lymphocyte escape variants during primary infection

21 June 2018

1 reference

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Antiviral pressure exerted by HIV-1-specific cytotoxic T lymphocytes (CTLs) during primary infection demonstrated by rapid selection of CTL escape virus

21 June 2018

1 reference

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Cytotoxic T-cell activity antagonized by naturally occurring HIV-1 Gag variants

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1904471

Cytotoxic T lymphocyte lysis inhibited by viable HIV mutants

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1904471

Human immunodeficiency virus genetic variation that can escape cytotoxic T cell recognition

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1904471

Update of the drug resistance mutations in HIV-1: Fall 2006.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1904471

Conflicting selective forces affect T cell receptor contacts in an immunodominant human immunodeficiency virus epitope

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1904471

HIV-1 Nef is preferentially recognized by CD8 T cells in primary HIV-1 infection despite a relatively high degree of genetic diversity

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1904471

Characterization of HLA-B57-restricted human immunodeficiency virus type 1 Gag- and RT-specific cytotoxic T lymphocyte responses

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1904471

Methods for comparing a DNA sequence with a protein sequence.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1904471

Founder Effects in the Assessment of HIV Polymorphisms and HLA Allele Associations

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1904471

The role of the proteasome in generating cytotoxic T-cell epitopes: insights obtained from improved predictions of proteasomal cleavage

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1904471

Loss of Viral Control in Early HIV‐1 Infection Is Temporally Associated with Sequential Escape from CD8+T Cell Responses and Decrease in HIV–1–Specific CD4+and CD8+T Cell Frequencies

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1904471

Evolution and transmission of stable CTL escape mutations in HIV infection

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1904471

CD8 T-cell responses in early HIV-1 infection are skewed towards high entropy peptides

31 October 2018

1 reference

12 December 2020

Transfer of HIV-1-specific cytotoxic T lymphocytes to an AIDS patient leads to selection for mutant HIV variants and subsequent disease progression

1 reference

12 December 2020

Late escape from an immunodominant cytotoxic T-lymphocyte response associated with progression to AIDS

1 reference

12 December 2020

Rates of disease progression by baseline CD4 cell count and viral load after initiating triple-drug therapy

1 reference

12 December 2020

Evidence of HIV-1 adaptation to HLA-restricted immune responses at a population level

1 reference

12 December 2020

Definition of specific peptide motifs for four major HLA-A alleles

1 reference

12 December 2020

10.1371/JOURNAL.PPAT.0030094

Identifiers

DOI

1 reference

25 July 2017

1 reference

25 July 2017

1 reference