(Q33302076)

English

Toxicogenomic analysis incorporating operon-transcriptional coupling and toxicant concentration-expression response: analysis of MX-treated Salmonella

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scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

Toxicogenomic analysis incorporating operon-transcriptional coupling and toxicant concentration-expression response: analysis of MX-treated Salmonella (English)

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

Michael McClelland

object named as

Michael McClelland

7

0 references

author name string

William O Ward

1

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

Carol D Swartz

2

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

Steffen Porwollik

3

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

Sarah H Warren

4

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

Nancy M Hanley

5

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

Geremy W Knapp

6

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

David M DeMarini

8

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

publication date

9 October 2007

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

BMC Bioinformatics

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

8

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

378

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

Cross talk between type III secretion and flagellar assembly systems in Pseudomonas aeruginosa.

1 reference

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Quantification of N-(deoxyguanosin-8-yl)-4-aminobiphenyl adducts in human lymphoblastoid TK6 cells dosed with N-hydroxy-4-acetylaminobiphenyl and their relationship to mutation, toxicity, and gene expression profiling

1 reference

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21 June 2018

Operon information improves gene expression estimation for cDNA microarrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2225428

21 June 2018

Comparison of algorithms for the analysis of Affymetrix microarray data as evaluated by co-expression of genes in known operons

1 reference

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21 June 2018

OpWise: operons aid the identification of differentially expressed genes in bacterial microarray experiments

1 reference

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Carcinogenicity of the chlorination disinfection by-product MX

1 reference

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Laboratory variability does not preclude identification of biological functions impacted by hydroxyurea

1 reference

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Altered expression of connexin43 in the inhibition of gap junctional intercellular communication by chlorohydroxyfuranones in WB-F344 rat liver epithelial cells

1 reference

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MX, a by-product of water chlorination, lacks in vivo genotoxicity in gpt delta mice but inhibits gap junctional intercellular communication in rat WB cells

1 reference

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1 reference

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Phenotypic anchoring of global gene expression profiles induced by N-hydroxy-4-acetylaminobiphenyl and benzo[a]pyrene diol epoxide reveals correlations between expression profiles and mechanism of toxicity

1 reference

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1 reference

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Open source clustering software

1 reference

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In silico analysis reveals substantial variability in the gene contents of the gamma proteobacteria LexA-regulon

1 reference

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A gene-coexpression network for global discovery of conserved genetic modules

1 reference

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21 June 2018

Identification of transcriptome profiles for the DNA-damaging agents bleomycin and hydrogen peroxide in L5178Y mouse lymphoma cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2225428

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A non-redundant microarray of genes for two related bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2225428

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Use of mechanism-based structure-activity relationships analysis in carcinogenic potential ranking for drinking water disinfection by-products

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2225428

21 June 2018

LIGAND: database of chemical compounds and reactions in biological pathways

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2225428

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The DeltauvrB mutations in the Ames strains of Salmonella span 15 to 119 genes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2225428

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A Bayesian framework for the analysis of microarray expression data: regularized t -test and statistical inferences of gene changes

1 reference

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RegulonDB (version 3.2): transcriptional regulation and operon organization in Escherichia coli K-12

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2225428

21 June 2018

Regulatory networks revealed by transcriptional profiling of damaged Saccharomyces cerevisiae cells: Rpn4 links base excision repair with proteasomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2225428

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Analysis of the SOS response in Salmonella enterica serovar typhimurium using RNA fingerprinting by arbitrarily primed PCR.

1 reference

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21 June 2018

Identification of additional genes belonging to the LexA regulon in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2225428

21 June 2018

DNA damage induced by the drinking water mutagen 3-chloro-4-(dichloromethyl)-5-hydroxy-2[5H]-furanone (MX) in mammalian cells in vitro and in mice

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2225428

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Global response of Saccharomyces cerevisiae to an alkylating agent

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2225428

21 June 2018

DNA damage induced by 3-chloro-4-(dichloromethyl)-5-hydroxy-2[5H]-furanone (MX) in HL-60 cells and purified DNA in vitro

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2225428

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Analysis of cellular responses to aflatoxin B(1) in yeast expressing human cytochrome P450 1A2 using cDNA microarrays

1 reference

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Mutation spectra in Salmonella of analogues of MX: implications of chemical structure for mutational mechanisms.

1 reference

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Revised methods for the Salmonella mutagenicity test

1 reference

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31 October 2018

Chemical space and biology

1 reference

https://pubmed.ncbi.nlm.nih.gov/17925033

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The operons, a criterion to compare the reliability of transcriptome analysis tools: ICA is more reliable than ANOVA, PLS and PCA

1 reference

https://pubmed.ncbi.nlm.nih.gov/17925033

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/1471-2105-8-378

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

DBLP publication ID

journals/bmcbi/WardSPWHKMD07

1 reference

DBLP Dataset 2021-01-02

28 January 2021

Dimensions Publication ID

0 references

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

ResearchGate publication ID

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