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ADAM15 gene structure and differential alternative exon use in human tissues.
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2148059
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8 January 2020
title
ADAM15 gene structure and differential alternative exon use in human tissues
(English)
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2148059
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8 January 2020
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Iivari Kleino
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1
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8 January 2020
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Rebekka M Ortiz
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2148059
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8 January 2020
Ari-Pekka J Huovila
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8 January 2020
publication date
15 October 2007
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8 January 2020
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BMC Molecular Biology
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8 January 2020
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8
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8 January 2020
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90
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8 January 2020
exact match
https://scigraph.springernature.com/pub.10.1186/1471-2199-8-90
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The disintegrin-metalloproteinases ADAM9, ADAM12, and ADAM15 are upregulated in gastric cancer.
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Expression of splice variants of the human ADAM15 gene and strong interaction between the cytoplasmic domain of one variant and Src family proteins Lck and Hck.
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Phosphorylation-dependent interactions between ADAM15 cytoplasmic domain and Src family protein-tyrosine kinases
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ADAM15 overexpression in NIH3T3 cells enhances cell-cell interactions
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Highly enhanced expression of the disintegrin metalloproteinase MDC15 (metargidin) in rheumatoid synovial tissue
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14 July 2018
A computational analysis of sequence features involved in recognition of short introns
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Androgens regulate the mammalian homologues of invertebrate sex determination genes tra-2 and fox-1
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Computational analysis of candidate intron regulatory elements for tissue-specific alternative pre-mRNA splicing
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Initial sequencing and analysis of the human genome
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A polymorphic GT repeat from the human cardiac Na+Ca2+ exchanger intron 2 activates splicing
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retrieved
14 July 2018
The CELF family of RNA binding proteins is implicated in cell-specific and developmentally regulated alternative splicing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2148059
retrieved
14 July 2018
Sorting out the complexity of SR protein functions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2148059
retrieved
14 July 2018
Conserved noncoding sequences are reliable guides to regulatory elements.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2148059
retrieved
14 July 2018
Alternative pre-mRNA splicing: the logic of combinatorial control
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2148059
retrieved
14 July 2018
Assignment of the ADAM15 gene to human chromosome band 1q21.3 by in situ hybridization
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2148059
retrieved
14 July 2018
EMBOSS: the European Molecular Biology Open Software Suite
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2148059
retrieved
14 July 2018
PipMaker--a web server for aligning two genomic DNA sequences
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2148059
retrieved
14 July 2018
Characterization of the mRNA ligands bound by the RNA binding protein hnRNP A2 utilizing a novel in vivo technique
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2148059
retrieved
14 July 2018
TRANSFAC: an integrated system for gene expression regulation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2148059
retrieved
14 July 2018
COMPEL: a database on composite regulatory elements providing combinatorial transcriptional regulation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2148059
retrieved
14 July 2018
Interaction of the metalloprotease disintegrins MDC9 and MDC15 with two SH3 domain-containing proteins, endophilin I and SH3PX1
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2148059
retrieved
14 July 2018
hnRNP complexes: composition, structure, and function
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2148059
retrieved
14 July 2018
Modulation of exon skipping by high-affinity hnRNP A1-binding sites and by intron elements that repress splice site utilization
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2148059
retrieved
14 July 2018
Binding of hnRNP H to an exonic splicing silencer is involved in the regulation of alternative splicing of the rat beta-tropomyosin gene
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2148059
retrieved
14 July 2018
Control of alternative pre-mRNA splicing by distributed pentameric repeats
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2148059
retrieved
14 July 2018
The neuronal RNA binding protein Nova-1 recognizes specific RNA targets in vitro and in vivo
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2148059
retrieved
14 July 2018
Expression of a disintegrin-like protein in cultured human vascular cells and in vivo.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2148059
retrieved
14 July 2018
Metargidin, a membrane-anchored metalloprotease-disintegrin protein with an RGD integrin binding sequence
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2148059
retrieved
14 July 2018
Nuclear proteins that bind the pre-mRNA 3' splice site sequence r(UUAG/G) and the human telomeric DNA sequence d(TTAGGG)n
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2148059
retrieved
14 July 2018
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2148059
retrieved
14 July 2018
Regulation of alternative pre-mRNA splicing by a novel repeated hexanucleotide element
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2148059
retrieved
14 July 2018
The UUAG-specific RNA binding protein, heterogeneous nuclear ribonucleoprotein D0. Common modular structure and binding properties of the 2xRBD-Gly family
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2148059
retrieved
14 July 2018
Isolation and characterization of a novel, low abundance hnRNP protein: A0
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2148059
retrieved
14 July 2018
RNA binding specificity of hnRNP A1: significance of hnRNP A1 high-affinity binding sites in pre-mRNA splicing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2148059
retrieved
14 July 2018
Altered expression of disintegrin metalloproteinases and their inhibitor in human dilated cardiomyopathy.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2148059
retrieved
31 October 2018
Accurate identification of alternatively spliced exons using support vector machine.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2148059
retrieved
31 October 2018
Comparative analysis detects dependencies among the 5' splice-site positions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2148059
retrieved
31 October 2018
Multiple cis elements regulate an alternative splicing event at 4.1R pre-mRNA during erythroid differentiation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2148059
retrieved
31 October 2018
Composite regulatory elements: classification and description in the COMPEL database
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2148059
retrieved
31 October 2018
High accumulation of components of the RNA polymerase II transcription machinery in rodent spermatids.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2148059
retrieved
31 October 2018
Melanoma cell-derived vascular endothelial growth factor induces endothelial tubulogenesis within fibrin gels by a metalloproteinase-mediated mechanism
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/17937806
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Human-mouse comparative analysis reveals that branch-site plasticity contributes to splicing regulation
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/17937806
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
AUF1 binding affinity to A+U-rich elements correlates with rapid mRNA degradation
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/17937806
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Up-regulation of MDC15 (metargidin) messenger RNA in human osteoarthritic cartilage
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/17937806
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1186/1471-2199-8-90
1 reference
stated in
Europe PubMed Central
PMC publication ID
2148059
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17937806%20AND%20SRC:MED&resulttype=core&format=json
retrieved
8 January 2020
PMC publication ID
2148059
1 reference
stated in
Europe PubMed Central
PMC publication ID
2148059
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17937806%20AND%20SRC:MED&resulttype=core&format=json
retrieved
8 January 2020
PubMed publication ID
17937806
1 reference
stated in
Europe PubMed Central
PMC publication ID
2148059
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17937806%20AND%20SRC:MED&resulttype=core&format=json
retrieved
8 January 2020
ResearchGate publication ID
5907263
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