(Q33316819)

25 July 2017

title

Co-regulation of metabolic genes is better explained by flux coupling than by network distance (English)

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25 July 2017

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4

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25 July 2017

Bas Teusink

2

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author name string

Richard A Notebaart

series ordinal

1

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25 July 2017

Roland J Siezen

series ordinal

3

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25 July 2017

publication date

1 January 2008

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PLOS Computational Biology

25 July 2017

published in

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25 July 2017

volume

4

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25 July 2017

issue

1

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25 July 2017

page(s)

e26

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Creative Commons Attribution 4.0 International

25 July 2017

copyright license

start time

25 January 2008

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April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

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21 June 2018

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Network-based prediction of protein function

21 June 2018

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Metabolic networks in motion: 13C-based flux analysis

21 June 2018

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The life-cycle of operons

21 June 2018

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Expression dynamics of a cellular metabolic network

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2211535

Unraveling the complexity of flux regulation: a new method demonstrated for nutrient starvation in Saccharomyces cerevisiae

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2211535

Towards multidimensional genome annotation

21 June 2018

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RegulonDB (version 5.0): Escherichia coli K-12 transcriptional regulatory network, operon organization, and growth conditions

21 June 2018

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From genomics to chemical genomics: new developments in KEGG

21 June 2018

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Metabolic functions of duplicate genes in Saccharomyces cerevisiae

21 June 2018

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Uncovering transcriptional regulation of metabolism by using metabolic network topology

21 June 2018

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21 June 2018

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21 June 2018

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Uniform sampling of steady-state flux spaces: means to design experiments and to interpret enzymopathies.

21 June 2018

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Genome-scale in silico models of E. coli have multiple equivalent phenotypic states: assessment of correlated reaction subsets that comprise network states.

21 June 2018

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Just-in-time transcription program in metabolic pathways

21 June 2018

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The metabolic world of Escherichia coli is not small

21 June 2018

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Flux coupling analysis of genome-scale metabolic network reconstructions.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2211535

It is all about metabolic fluxes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2211535

An expanded genome-scale model of Escherichia coli K-12 (iJR904 GSM/GPR)

21 June 2018

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STRING: a database of predicted functional associations between proteins

21 June 2018

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Network motifs in the transcriptional regulation network of Escherichia coli

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2211535

Metabolic flux responses to pyruvate kinase knockout in Escherichia coli

21 June 2018

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Evaluation of predicted network modules in yeast metabolism using NMR-based metabolite profiling

21 June 2018

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Optimal gene partition into operons correlates with gene functional order.

31 October 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2211535

Adaptive evolution of bacterial metabolic networks by horizontal gene transfer.

31 October 2018

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Principles of transcriptional control in the metabolic network of Saccharomyces cerevisiae

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2211535

Prediction of temporal gene expression. Metabolic opimization by re-distribution of enzyme activities.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2211535

Operon prediction based on SVM

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2211535

Design of Metabolic Control for Large Flux Changes

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18225949

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PCBI.0040026

1 reference

journals/ploscb/NotebaartTSP08

25 July 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

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25 July 2017

1 reference