(Q33322237)

25 July 2017

OptCircuit: an optimization based method for computational design of genetic circuits (English)

1 reference

25 July 2017

1 reference

Costas D Maranas

2

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author name string

Madhukar S Dasika

series ordinal

1

1 reference

25 July 2017

3 March 2008

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25 July 2017

1 reference

25 July 2017

2

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25 July 2017

24

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Creative Commons Attribution 2.0 Generic

25 July 2017

start time

3 March 2008

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

1 reference

April 2022 Public Data File from Crossref

exact match

https://scigraph.springernature.com/pub.10.1186/1752-0509-2-24

0 references

cites work

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Optimization of a stochastically simulated gene network model via simulated annealing.

14 July 2018

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Environmentally controlled invasion of cancer cells by engineered bacteria

14 July 2018

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Foundations for engineering biology

14 July 2018

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Reconstruction of genetic circuits

14 July 2018

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Synthetic biology: engineering Escherichia coli to see light

14 July 2018

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Model-driven designs of an oscillating gene network

14 July 2018

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Ultrasensitivity and noise propagation in a synthetic transcriptional cascade.

14 July 2018

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Accurate multiplex gene synthesis from programmable DNA microchips

14 July 2018

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14 July 2018

Biological robustness

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Optimizing genetic circuits by global sensitivity analysis

14 July 2018

1 reference

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Programmable cells: interfacing natural and engineered gene networks

14 July 2018

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Design of genetic networks with specified functions by evolution in silico.

14 July 2018

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The Coherent Feedforward Loop Serves as a Sign-sensitive Delay Element in Transcription Networks

14 July 2018

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Importance of input perturbations and stochastic gene expression in the reverse engineering of genetic regulatory networks: insights from an identifiability analysis of an in silico network

14 July 2018

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Structure and function of the feed-forward loop network motif

14 July 2018

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Artificial regulatory networks and cascades for discrete multilevel transgene control in mammalian cells

14 July 2018

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Designer gene networks: Towards fundamental cellular control.

14 July 2018

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Engineering a mevalonate pathway in Escherichia coli for production of terpenoids

14 July 2018

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Sniffers, buzzers, toggles and blinkers: dynamics of regulatory and signaling pathways in the cell

14 July 2018

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An ensemble method for identifying regulatory circuits with special reference to the qa gene cluster of Neurospora crassa.

14 July 2018

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Directed evolution of a genetic circuit

14 July 2018

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Engineered gene circuits.

14 July 2018

1 reference

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Genetic "code": representations and dynamical models of genetic components and networks

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324073

Combinatorial synthesis of genetic networks

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324073

Synchronizing genetic relaxation oscillators by intercell signaling

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324073

Engineering stability in gene networks by autoregulation

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324073

Toggles and oscillators: new genetic circuit designs

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324073

Noise-based switches and amplifiers for gene expression

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324073

Construction of a genetic toggle switch in Escherichia coli

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324073

A synthetic oscillatory network of transcriptional regulators

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324073

Independent and tight regulation of transcriptional units in Escherichia coli via the LacR/O, the TetR/O and AraC/I1-I2 regulatory elements

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324073

Role of a peptide tagging system in degradation of proteins synthesized from damaged messenger RNA

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324073

Computer-aided design of modular protein devices: Boolean AND gene activation.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324073

The effect of negative feedback on noise propagation in transcriptional gene networks.

31 October 2018

1 reference

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A synthetic gene-metabolic oscillator.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324073

A synthetic multicellular system for programmed pattern formation

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324073

Evolving complex dynamics in electronic models of genetic networks.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324073

Biological networks: the tinkerer as an engineer.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324073

Development of genetic circuitry exhibiting toggle switch or oscillatory behavior in Escherichia coli

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324073

How to make a biological switch

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2324073

31 October 2018

Identifiers

DOI

10.1186/1752-0509-2-24

1 reference

25 July 2017

journals/bmcsb/DasikaM08

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

25 July 2017

1 reference

PubMed ID

18315885