(Q33325622)

English

Revealing pancrustacean relationships: phylogenetic analysis of ribosomal protein genes places Collembola (springtails) in a monophyletic Hexapoda and reinforces the discrepancy between mitochondrial and nuclear DNA markers

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scholarly article

1 reference

Europe PubMed Central

25 July 2017

Revealing pancrustacean relationships: phylogenetic analysis of ribosomal protein genes places Collembola (springtails) in a monophyletic Hexapoda and reinforces the discrepancy between mitochondrial and nuclear DNA markers (English)

1 reference

Europe PubMed Central

25 July 2017

1 reference

based on heuristic

inferred from title

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object named as

D Roelofs

2

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author name string

M J T N Timmermans

1

1 reference

Europe PubMed Central

25 July 2017

J Mariën

3

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Europe PubMed Central

25 July 2017

N M van Straalen

4

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Europe PubMed Central

25 July 2017

publication date

12 March 2008

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Europe PubMed Central

25 July 2017

BMC Evolutionary Biology

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Europe PubMed Central

25 July 2017

8

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Europe PubMed Central

25 July 2017

83

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Europe PubMed Central

25 July 2017

https://scigraph.springernature.com/pub.10.1186/1471-2148-8-83

0 references

Detecting coevolution in and among protein domains

1 reference

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1 reference

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21 June 2018

Collembase: a repository for springtail genomics and soil quality assessment

1 reference

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1 reference

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Phylogenetic analysis of mitochondrial protein coding genes confirms the reciprocal paraphyly of Hexapoda and Crustacea

1 reference

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MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0

1 reference

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The effect of model choice on phylogenetic inference using mitochondrial sequence data: lessons from the scorpions.

1 reference

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Site specific rates of mitochondrial genomes and the phylogeny of eutheria

1 reference

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Further use of nearly complete 28S and 18S rRNA genes to classify Ecdysozoa: 37 more arthropods and a kinorhynch

1 reference

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Assessment of methods for amino acid matrix selection and their use on empirical data shows that ad hoc assumptions for choice of matrix are not justified

1 reference

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Phylogeny of Arthropoda inferred from mitochondrial sequences: strategies for limiting the misleading effects of multiple changes in pattern and rates of substitution

1 reference

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1 reference

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Mitochondrial genomes suggest that hexapods and crustaceans are mutually paraphyletic

1 reference

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21 June 2018

Pancrustacean phylogeny: hexapods are terrestrial crustaceans and maxillopods are not monophyletic

1 reference

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prot4EST: translating expressed sequence tags from neglected genomes

1 reference

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Prospects for building the tree of life from large sequence databases

1 reference

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Performance of maximum parsimony and likelihood phylogenetics when evolution is heterogeneous

1 reference

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RPG: the Ribosomal Protein Gene database

1 reference

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1 reference

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21 June 2018

Comment on "Hexapod origins: monophyletic or paraphyletic?".

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2315649

21 June 2018

MrBayes 3: Bayesian phylogenetic inference under mixed models

1 reference

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Multiple sequence alignment with the Clustal series of programs

1 reference

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21 June 2018

Hexapod origins: monophyletic or paraphyletic?

1 reference

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The Bioperl toolkit: Perl modules for the life sciences

1 reference

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Identification and analysis of over 2000 ribosomal protein pseudogenes in the human genome

1 reference

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TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing

1 reference

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Hox genes and the phylogeny of the arthropods

1 reference

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A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach

1 reference

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Phylogenetic analysis of arthropods using two nuclear protein-encoding genes supports a crustacean + hexapod clade

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2315649

21 June 2018

Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis

1 reference

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A map of 75 human ribosomal protein genes

1 reference

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Likelihood-mapping: a simple method to visualize phylogenetic content of a sequence alignment

1 reference

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Basic local alignment search tool

1 reference

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Differential gene expression profiles associated with heavy metal tolerance in the soil insect Orchesella cincta.

1 reference

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31 October 2018

Evolution. The origin of insects.

1 reference

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The phylogenetic positions of three Basal-hexapod groups (protura, diplura, and collembola) based on ribosomal RNA gene sequences

1 reference

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Ecdysozoan phylogeny and Bayesian inference: first use of nearly complete 28S and 18S rRNA gene sequences to classify the arthropods and their kin.

1 reference

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How do insect nuclear and mitochondrial gene substitution patterns differ? Insights from Bayesian analyses of combined datasets.

1 reference

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rtREV: an amino acid substitution matrix for inference of retrovirus and reverse transcriptase phylogeny

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1 reference

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1 reference

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31 October 2018

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1 reference

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A transcriptomic analysis of the phylum Nematoda

1 reference

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31 October 2018

Identifiers

10.1186/1471-2148-8-83

1 reference

Europe PubMed Central

25 July 2017

Dimensions Publication ID

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https://scigraph.springernature.com/pub.10.1186/1471-2148-8-83

9 September 2019

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Europe PubMed Central

25 July 2017

1 reference

Europe PubMed Central

25 July 2017

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