(Q33325922)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18369476%20AND%20SRC:MED&resulttype=core&format=json

4 January 2020

title

HTLV-1 integration into transcriptionally active genomic regions is associated with proviral expression and with HAM/TSP (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18369476%20AND%20SRC:MED&resulttype=core&format=json

Human T-lymphotropic virus 1

4 January 2020

main subject

0 references

author

Jeremy Leipzig

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18369476%20AND%20SRC:MED&resulttype=core&format=json

4 January 2020

Frederic D. Bushman

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18369476%20AND%20SRC:MED&resulttype=core&format=json

4 January 2020

Charles Bangham

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18369476%20AND%20SRC:MED&resulttype=core&format=json

4 January 2020

author name string

Kiran N Meekings

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18369476%20AND%20SRC:MED&resulttype=core&format=json

4 January 2020

Graham P Taylor

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18369476%20AND%20SRC:MED&resulttype=core&format=json

4 January 2020

publication date

21 March 2008

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18369476%20AND%20SRC:MED&resulttype=core&format=json

4 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18369476%20AND%20SRC:MED&resulttype=core&format=json

4 January 2020

volume

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18369476%20AND%20SRC:MED&resulttype=core&format=json

4 January 2020

page(s)

e1000027

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18369476%20AND%20SRC:MED&resulttype=core&format=json

4 January 2020

issue

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18369476%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

4 January 2020

copyright license

start time

21 March 2008

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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1 reference

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21 June 2018

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LEDGF/p75 functions downstream from preintegration complex formation to effect gene-specific HIV-1 integration

21 June 2018

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Genome-wide fitness test and mechanism-of-action studies of inhibitory compounds in Candida albicans

21 June 2018

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HIV integration site selection: analysis by massively parallel pyrosequencing reveals association with epigenetic modifications

21 June 2018

1 reference

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In vivo T lymphocyte dynamics in humans and the impact of human T-lymphotropic virus 1 infection

21 June 2018

1 reference

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Human T-cell leukemia virus type 1 integration target sites in the human genome: comparison with those of other retroviruses

21 June 2018

1 reference

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Quantifying HTLV-I dynamics

21 June 2018

1 reference

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Integration of human immunodeficiency virus type 1 in untreated infection occurs preferentially within genes

21 June 2018

1 reference

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Retroviral DNA integration: viral and cellular determinants of target-site selection

21 June 2018

1 reference

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Murine leukemia virus vector integration favors promoter regions and regional hot spots in a human T-cell line

21 June 2018

1 reference

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Integration bias of gammaretrovirus vectors following transduction and growth of primary mouse hematopoietic progenitor cells with and without selection

21 June 2018

1 reference

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Genome-wide mapping of foamy virus vector integrations into a human cell line

21 June 2018

1 reference

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Foamy virus vector integration sites in normal human cells

21 June 2018

1 reference

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Quantification of the virus-host interaction in human T lymphotropic virus I infection.

21 June 2018

1 reference

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A role for LEDGF/p75 in targeting HIV DNA integration

21 June 2018

1 reference

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Genome-wide analysis of retroviral DNA integration

21 June 2018

1 reference

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Symmetrical base preferences surrounding HIV-1, avian sarcoma/leukosis virus, and murine leukemia virus integration sites

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265437

Weak palindromic consensus sequences are a common feature found at the integration target sites of many retroviruses

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265437

Mechanisms of haploinsufficiency revealed by genome-wide profiling in yeast

21 June 2018

1 reference

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Integration target site selection for retroviruses and transposable elements.

21 June 2018

1 reference

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Retroviral DNA integration: ASLV, HIV, and MLV show distinct target site preferences

21 June 2018

1 reference

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Resting CD4+ T cells from human immunodeficiency virus type 1 (HIV-1)-infected individuals carry integrated HIV-1 genomes within actively transcribed host genes

21 June 2018

1 reference

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Integrase-specific enhancement and suppression of retroviral DNA integration by compacted chromatin structure in vitro

21 June 2018

1 reference

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Rapid isolation of viral integration site reveals frequent integration of HTLV-1 into expressed loci

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265437

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21 June 2018

1 reference

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Targeting survival: integration site selection by retroviruses and LTR-retrotransposons

21 June 2018

1 reference

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Transcription start regions in the human genome are favored targets for MLV integration

21 June 2018

1 reference

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Spread of HTLV-I between lymphocytes by virus-induced polarization of the cytoskeleton

21 June 2018

1 reference

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HIV-1 integration in the human genome favors active genes and local hotspots

21 June 2018

1 reference

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21 June 2018

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HTLV-I proviral load correlates with progression of motor disability in HAM/TSP: analysis of 239 HAM/TSP patients including 64 patients followed up for 10 years

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265437

The influence of HLA class I alleles and heterozygosity on the outcome of human T cell lymphotropic virus type I infection

21 June 2018

1 reference

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21 June 2018

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21 June 2018

1 reference

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HLA alleles determine human T-lymphotropic virus-I (HTLV-I) proviral load and the risk of HTLV-I-associated myelopathy

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265437

Analysis of HTLV-I proviral load in 202 HAM/TSP patients and 243 asymptomatic HTLV-I carriers: high proviral load strongly predisposes to HAM/TSP.

21 June 2018

1 reference

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Quantification of proviral DNA load in human T-cell leukaemia virus type I infections

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265437

Persistent oligoclonal expansion of human T-cell leukemia virus type 1-infected circulating cells in patients with Tropical spastic paraparesis/HTLV-1 associated myelopathy

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265437

Chromosome structure and human immunodeficiency virus type 1 cDNA integration: centromeric alphoid repeats are a disfavored target

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265437

Sequence analysis of the human DNA flanking sites of human immunodeficiency virus type 1 integration

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265437

Retroviral integration: in vitro host site selection by avian integrase.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265437

Clonal expansion of human T-cell leukemia virus type I-infected cells in asymptomatic and symptomatic carriers without malignancy

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265437

Viral dynamics in human immunodeficiency virus type 1 infection

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265437

In vitro integration of human immunodeficiency virus type 1 cDNA into targets containing protein-induced bends

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265437

Retroviral integration into minichromosomes in vitro

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265437

Target-sequence preferences of HIV-1 integration complexes in vitro.

21 June 2018

1 reference

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A functional CD8+ cell assay reveals individual variation in CD8+ cell antiviral efficacy and explains differences in human T-lymphotropic virus type 1 proviral load

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1000027

Oligoclonal proliferation of human T-cell leukaemia virus type 1 bearing T cells in adult T-cell leukaemia/lymphoma without deletion of the 3' provirus integration sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1000027

Integration of human T-cell leukemia virus type 1 in genes of leukemia cells of patients with adult T-cell leukemia

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1000027

Preferential selection of human T-cell leukemia virus type I provirus integration sites in leukemic versus carrier states

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1000027

Selection forces and constraints on retroviral sequence variation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1000027

Cancer: hay in a haystack

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1000027

HIV integration site selection: targeting in macrophages and the effects of different routes of viral entry.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2265437

Exploring the etiology of haploinsufficiency

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18369476

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The influence of DNA and nucleosome structure on integration events directed by HIV integrase

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18369476

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PPAT.1000027

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18369476%20AND%20SRC:MED&resulttype=core&format=json

4 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18369476%20AND%20SRC:MED&resulttype=core&format=json

4 January 2020

1 reference