(Q33724262)

28 July 2017

Weak palindromic consensus sequences are a common feature found at the integration target sites of many retroviruses (English)

1 reference

28 July 2017

Shawn M Burgess

4

0 references

author name string

Xiaolin Wu

1

1 reference

28 July 2017

Yuan Li

2

1 reference

28 July 2017

Bruce Crise

3

1 reference

28 July 2017

David J Munroe

5

1 reference

28 July 2017

language of work or name

1 reference

1 April 2005

1 reference

28 July 2017

1 reference

28 July 2017

79

1 reference

28 July 2017

5211-5214

1 reference

28 July 2017

8

1 reference

Integration target site selection for retroviruses and transposable elements.

28 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069554

Genome-wide analyses of avian sarcoma virus integration sites

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069554

Retroviral DNA integration: ASLV, HIV, and MLV show distinct target site preferences

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069554

Integrase-specific enhancement and suppression of retroviral DNA integration by compacted chromatin structure in vitro

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069554

Targeting survival: integration site selection by retroviruses and LTR-retrotransposons

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069554

Transcription start regions in the human genome are favored targets for MLV integration

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069554

HIV-1 integration in the human genome favors active genes and local hotspots

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069554

A-form conformational motifs in ligand-bound DNA structures

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069554

Insertion site preferences of the P transposable element in Drosophila melanogaster

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069554

DNA sequence-dependent deformability deduced from protein-DNA crystal complexes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069554

Chromosome structure and human immunodeficiency virus type 1 cDNA integration: centromeric alphoid repeats are a disfavored target

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069554

Sequence analysis of the human DNA flanking sites of human immunodeficiency virus type 1 integration

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069554

Integration of murine leukemia virus DNA depends on mitosis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069554

Passage through mitosis is required for oncoretroviruses but not for the human immunodeficiency virus

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069554

Retroviral integration: in vitro host site selection by avian integrase.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069554

Human immunodeficiency virus integrase directs integration to sites of severe DNA distortion within the nucleosome core

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069554

DNA bending creates favored sites for retroviral integration: an explanation for preferred insertion sites in nucleosomes.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069554

Sequence-dependent bending propensity of DNA as revealed by DNase I: parameters for trinucleotides

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069554

In vitro integration of human immunodeficiency virus type 1 cDNA into targets containing protein-induced bends

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069554

Nucleosomes, DNA-binding proteins, and DNA sequence modulate retroviral integration target site selection

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069554

Retroviral integration into minichromosomes in vitro

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069554

Target-sequence preferences of HIV-1 integration complexes in vitro.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069554

The influence of DNA and nucleosome structure on integration events directed by HIV integrase

30 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15795304

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

[The A-form of DNA: in search of the biological role]

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15795304

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Rod models of DNA: sequence-dependent anisotropic elastic modelling of local bending phenomena

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15795304

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1128/JVI.79.8.5211-5214.2005

1 reference

28 July 2017

1 reference

28 July 2017

1 reference