(Q33327740)

25 July 2017

Analysis of Aspergillus nidulans metabolism at the genome-scale (English)

1 reference

Putative potassium-transporting ATPase with a predicted role in energy metabolism

25 July 2017

0 references

Putative aromatic-amino-acid transaminase with a predicted role in aromatic amino acid biosynthesis

0 references

malate dehydrogenase, putative

0 references

Inositol phosphoceramide synthase

0 references

galactokinase, putative

0 references

Acetolactate synthase, large subunit

0 references

Putative 3-hydroxyacyl-CoA dehydrogenase with a predicted role in fatty acid metabolism

0 references

Putative F1F0-ATPase complex subunit with a predicted role in energy metabolism

0 references

Putative 3-hydroxy-3-methylglutaryl coenzyme A synthase with a predicted role in sterol metabolism

0 references

Putative calcium-transporting mitochondrial ATPase involved in calcium homeostasis

0 references

Putative acetate kinase

0 references

Putative phosphoketolase with a predicted role in the phosphoketolase pathway

0 references

Putative glutaminase A with a predicted role in glutamate and glutamine metabolism

0 references

Putative pyruvate decarboxylase with a predicted role in pyruvate metabolism or penicillin biosynthesis

0 references

Class V chitinase

0 references

Plasma membrane ATPase with a predicted role in energy metabolism

0 references

Putative glucan 1,3-beta-glucosidase with a predicted role in glucan metabolism

0 references

putative alpha-glucosidase (maltase)

0 references

Putative reductase with a predicted role in carbohydrate metabolism

0 references

Putative glucan 1,3-beta-glucosidase with a predicted role in glucan metabolism

0 references

Putative pantothenate kinase with a predicted role in Coenzyme A and pantothenate biosynthesis

0 references

Putative tartrate dehydrogenase with a predicted role in tartrate (four-carbon) metabolism

0 references

Putative succinate-semialdehyde dehydrogenase [NAD(P)+] with a predicted role in 4-aminobutyrate (GABA) shunt

0 references

Putative glutaminase

0 references

Putative aspartate semialdehyde dehydrogenase with a predicted role in glycine, serine, and threonine metabolism

0 references

Putative phosphotransferase with a predicted role in phospholipid metabolism

0 references

Adenosine 3-phosphate 5-phosphosulfate (PAPS) reductase involved in sulfate assimilation

0 references

ATP sulfurylase involved in sulfate assimilation

0 references

putative phosphoribosylaminoimidazolesuccinocarboxamide synthase

0 references

UDP-glucose 4-epimerase, involved in galactose metabolism

0 references

Phosphatidylinositol kinase

0 references

3-methylcrotonyl-CoA carboxylase alpha subunit

0 references

Putative triacylglycerol lipase with a predicted role in glycerolipid metabolism

0 references

allantoinase

0 references

Kynurenine formamidase, putative

0 references

chitin synthase, putative

0 references

asparagine-tRNA ligase, putative

0 references

Putative cytochrome c oxidase subunit with a predicted role in energy metabolism

0 references

Putative bifunctional enzyme with a predicted role in purine metabolism

0 references

Putative pyruvate carboxylase or glutathione synthase

0 references

5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase, putative

0 references

acetolactate synthase small subunit

0 references

Putative diphosphomevalonate decarboxylase with a predicted role in sterol metabolism

0 references

ornithine carbamoyltransferase

0 references

Putative asparagine synthase with a predicted role in asparagine metabolism

0 references

Pyrimidine-5'-nucleotide nucleosidase, putative

0 references

Putative ubiquinol-cytochrome-c reductase subunit with a predicted role in energy metabolism

0 references

Putative tetrahydrofolylpolyglutamate synthase with a predicted role in folate biosynthesis

0 references

Putative ribonucleotide reductase large chain with a predicted role in nucleotide salvage pathways

0 references

Putative NADP-linked glutamate dehydrogenase

0 references

Protein with polygalacturonase activity, involved in degradation of pectin

0 references

chitin synthase, putative

0 references

L-arabinitol 4-dehydrogenase, putative

0 references

Putative branched chain amino acid aminotransferase with a predicted role in valine, leucine, and isoleucine metabolism

0 references

Putative phosphoethanolamine cytidylyltransferase with a predicted role in phospholipid metabolism

0 references

Putative uracil phosphoribosyltransferase with a predicted role in pyrimidine metabolism

0 references

Putative phosphoglycerate dehydrogenase with a predicted role in glycine, serine, and threonine metabolism

0 references

Putative aspartate kinase with a predicted role in glycine, serine, and threonine metabolism

0 references

Putative 1,3-beta-glucan synthase with a predicted role in glucan biosynthesis

0 references

Putative homoserine kinase with a predicted role in glycine, serine, and threonine metabolism

0 references

Putative dehydrogenase with a predicted role in carbohydrate metabolism

0 references

succinate dehydrogenase (ubiquinone), putative

0 references

Putative D-xylulokinase with a predicted role in xylulose metabolism

0 references

Putative S-formylglutathione hydrolase with a predicted role in pyruvate metabolism

0 references

acetamidase

0 references

Putative bifunctional enzyme with a predicted role in arginine metabolism

0 references

Methylisocitrate lyase

0 references

Putative asparagine synthase with a predicted role in asparagine metabolism

0 references

Putative phosphoglycerate mutase with a predicted role in gluconeogenesis and glycolysis

0 references

Putative aspartate transaminase with a predicted role in alanine and aspartate metabolism

0 references

Putative fumarate dehydratase with a predicted role in the TCA cycle

0 references

glucosamine 6-phosphate N-acetyltransferase, putative

0 references

Putative aminomethyltransferase with a predicted role in glycine, serine, and threonine metabolism

0 references

Putative alpha,alpha-trehalose-phosphate synthase (UDP-forming) with a predicted role in trehalose biosynthesis

0 references

Conidia-specific catalase

0 references

Putative multifunctional enzyme with a predicted role in cytosolic fatty acid formation

0 references

Putative branched chain amino acid aminotransferase with a predicted role in valine, leucine, and isoleucine metabolism

0 references

Putative fatty-acyl-CoA synthase with a predicted role in cytosolic fatty acid formation

0 references

Putative glucose oxidase with a predicted role in gluconic acid and gluconate metabolism

0 references

Polyketide synthase

0 references

Putative phosphatidylserine decarboxylase with a predicted role in phospholipid metabolism

0 references

Putative ribokinase with a predicted role in ribose metabolism

0 references

arabinan endo-1,5-alpha-L-arabinosidase

0 references

Putative glycogen (starch) synthase with a predicted role in glycogen biosynthesis

0 references

Putative bifunctional enzyme with a predicted role in sterol metabolism

0 references

glyceraldehyde-3-phosphate dehydrogenase

0 references

Putative triacylglycerol lipase with a predicted role in glycerolipid metabolism

0 references

Cysteine synthase

0 references

Putative deoxyhypusine synthase with a predicted role in arginine metabolism

0 references

Putative oxalate decarboxylase with a predicted role in oxalic acid metabolism

0 references

Putative L-iditol 2-dehydrogenase with a predicted role in mannose/mannitol, fructose, and sorbose/sorbitol metabolism

0 references

Ortholog(s) have ATPase activity

0 references

Putative oxidoreductase with a predicted role in carbohydrate metabolism

0 references

Putative cytochrome c oxidase subunit with a predicted role in energy metabolism

0 references

phosphoribosylformylglycinamidine synthase, putative

0 references

Alpha-galactosidase

0 references

asparaginase, putative

0 references

Putative GTP cyclohydrolase I with a predicted role in folate biosynthesis

0 references

Putative dTMP kinase with a predicted role in pyrimidine metabolism

0 references

Methylenetetrahydrofolate reductase (NADPH)

0 references

Putative nucleoside diphosphate kinase with a predicted role in phospholipid metabolism

0 references

Putative plasma membrane ATPase with a predicted role in energy metabolism

0 references

Putative S-adenosylmethionine decarboxylase with a predicted role in arginine metabolism

0 references

Endochitinase A

0 references

Putative 2,3-oxidosqualene-lanosterol cyclase with a predicted role in sterol metabolism

0 references

Putative ubiquinol-cytochrome-c reductase subunit with a predicted role in energy metabolism

0 references

citrate synthase, mitochondrial

0 references

Homocysteine synthase

0 references

long-chain-fatty-acid-CoA ligase, putative

0 references

14-alpha sterol demethylase, putative

0 references

Essential 1-phosphatidylinositol 4-kinase with a predicted role in phospholipid metabolism

0 references

Putative kinase with a predicted role in nucleotide or phospholipid metabolism

0 references

Putative phosphoacetylglucosamine mutase with a predicted role in chitin biosynthesis

0 references

Putative cytosine deaminase with a predicted role in pyrimidine metabolism

0 references

Putative dehydratase with a predicted role in glycine, serine, and threonine metabolism

0 references

Putative lactoylglutathione lyase with a predicted role in the methylglyoxal bypass

0 references

glutamate-ammonia ligase, putative

0 references

Putative dehydrogenase with a predicted role in metabolism or penicillin biosynthesis

0 references

Putative C-14 sterol reductase with a predicted role in sterol metabolism

0 references

Putative ADP/ATP carrier protein with a predicted role in energy metabolism

0 references

Putative acid phosphatase with a predicted role in gluconic acid and gluconate metabolism

0 references

Putative dehydrogenase with a predicted role in metabolism or penicillin biosynthesis

0 references

Cell wall glucan 1,6-beta-glucosidase, putative

0 references

Putative cytochrome P450

0 references

Putative 5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole lyase with a predicted role in purine metabolism

0 references

Aspergillus nidulans

object named as

Aspergillus nidulans

1 reference

4

1 reference

25 July 2017

Helga David

1

1 reference

25 July 2017

Ilknur S Ozçelik

series ordinal

2

1 reference

25 July 2017

Gerald Hofmann

series ordinal

3

1 reference

25 July 2017

language of work or name

English

0 references

publication date

11 April 2008

1 reference

25 July 2017

1 reference

25 July 2017

9

1 reference

25 July 2017

163

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-9-163

25 July 2017

0 references

cites work

Metabolic network driven analysis of genome-wide transcription data from Aspergillus nidulans

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386489

Modeling hybridoma cell metabolism using a generic genome-scale metabolic model of Mus musculus

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386489

Uncovering transcriptional regulation of metabolism by using metabolic network topology

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386489

Computational prediction of human metabolic pathways from the complete human genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386489

From genomics to post-genomics in Aspergillus

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386489

Combining transcriptome data with genomic and cDNA sequence alignments to make confident functional assignments for Aspergillus nidulans genes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386489

Genome-wide high-throughput screens in functional genomics

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386489

A Bayesian method for identifying missing enzymes in predicted metabolic pathway databases

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386489

Clustered pathway genes in aflatoxin biosynthesis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386489

Reconstruction of the central carbon metabolism of Aspergillus niger

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386489

Missing genes in metabolic pathways: a comparative genomics approach

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386489

Genome-scale reconstruction of the Saccharomyces cerevisiae metabolic network

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386489

Predicting regulons and their cis-regulatory motifs by comparative genomics

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386489

Functional analysis of gapped microbial genomes: amino acid metabolism of Thiobacillus ferrooxidans

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386489

Protein interaction maps for complete genomes based on gene fusion events

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386489

Microbial genomes and "missing" enzymes: redefining biochemical pathways.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386489

Assigning protein functions by comparative genome analysis: Protein phylogenetic profiles

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386489

The use of gene clusters to infer functional coupling

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386489

Identification of enzymes and quantification of metabolic fluxes in the wild type and in a recombinant aspergillus oryzae strain

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386489

The optimization of penicillin biosynthesis in fungi

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386489

The validity of the Aspergillus nidulans linkage map.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386489

Relationship between energy substrate utilization and specific growth rate in Aspergillus nidulans

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386489

Lipid profiles of Aspergillus niger and its unsaturated fatty acid auxotroph, UFA2.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386489

Improved tools for biological sequence comparison

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386489

Basic local alignment search tool

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386489

CreA influences the metabolic fluxes of Aspergillus nidulans during growth on glucose and xylose

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386489

Influence of carbon source on alpha-amylase production by Aspergillus oryzae

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386489

Transcription analysis using high-density micro-arrays of Aspergillus nidulans wild-type and creA mutant during growth on glucose or ethanol

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18405346

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

An extreme creA mutation in Aspergillus nidulans has severe effects on D-glucose utilization

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18405346

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Guilt-by-association goes global

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18405346

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2164-9-163

1 reference

Dimensions Publication ID

25 July 2017

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-9-163

9 September 2019

1 reference

25 July 2017

1 reference