(Q33332464)

25 July 2017

title

A novel Bayesian DNA motif comparison method for clustering and retrieval (English)

1 reference

25 July 2017

4

1 reference

25 July 2017

3

Hanah Margalit

0 references

Tommy Kaplan

object named as

Tommy Kaplan

series ordinal

2

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author name string

Naomi Habib

series ordinal

1

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25 July 2017

publication date

29 February 2008

1 reference

PLOS Computational Biology

25 July 2017

published in

1 reference

25 July 2017

volume

4

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25 July 2017

issue

2

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25 July 2017

page(s)

e1000010

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Creative Commons Attribution 4.0 International

25 July 2017

copyright license

start time

29 February 2008

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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21 June 2018

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21 June 2018

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Regulation of mating and filamentation genes by two distinct Ste12 complexes in Saccharomyces cerevisiae

21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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Direct activation of genes involved in intracellular iron use by the yeast iron-responsive transcription factor Aft2 without its paralog Aft1.

21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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Combining phylogenetic data with co-regulated genes to identify regulatory motifs

21 June 2018

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Sequencing and comparison of yeast species to identify genes and regulatory elements

21 June 2018

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Program-specific distribution of a transcription factor dependent on partner transcription factor and MAPK signaling.

21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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Nucleotides of transcription factor binding sites exert interdependent effects on the binding affinities of transcription factors

21 June 2018

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A second iron-regulatory system in yeast independent of Aft1p

21 June 2018

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Genomic expression programs in the response of yeast cells to environmental changes

21 June 2018

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DNA binding sites: representation and discovery

21 June 2018

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Computational identification of cis-regulatory elements associated with groups of functionally related genes in Saccharomyces cerevisiae

21 June 2018

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Cluster analysis and display of genome-wide expression patterns

21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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Combinatorial control required for the specificity of yeast MAPK signaling

21 June 2018

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21 June 2018

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21 June 2018

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The value of prior knowledge in discovering motifs with MEME

21 June 2018

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Critical comparison of consensus methods for molecular sequences

21 June 2018

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Comparative analysis of methods for representing and searching for transcription factor binding sites.

21 June 2018

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Within the twilight zone: a sensitive profile-profile comparison tool based on information theory.

21 January 2018

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TAMO: a flexible, object-oriented framework for analyzing transcriptional regulation using DNA-sequence motifs

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000010

SCPD: a promoter database of the yeast Saccharomyces cerevisiae.

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000010

Fus3-regulated Tec1 degradation through SCFCdc4 determines MAPK signaling specificity during mating in yeast

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000010

A modelling approach to quantify dynamic crosstalk between the pheromone and the starvation pathway in baker's yeast.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000010

Rst1 and Rst2 are required for the a/alpha diploid cell type in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000010

A Gibbs sampling method to detect overrepresented motifs in the upstream regions of coexpressed genes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000010

CIS: compound importance sampling method for protein-DNA binding site p-value estimation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000010

Three yeast proteome databases: YPD, PombePD, and Ca1PD (MycoPathPD)

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000010

BEST: binding-site estimation suite of tools

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18463706

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Pheromone-regulated sumoylation of transcription factors that mediate the invasive to mating developmental switch in yeast

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18463706

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PCBI.1000010

1 reference

journals/ploscb/HabibKMF08

25 July 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

25 July 2017

1 reference