(Q33334228)

English

Impact of point-mutations on the hybridization affinity of surface-bound DNA/DNA and RNA/DNA oligonucleotide-duplexes: comparison of single base mismatches and base bulges

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scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

Impact of point-mutations on the hybridization affinity of surface-bound DNA/DNA and RNA/DNA oligonucleotide-duplexes: comparison of single base mismatches and base bulges (English)

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

author name string

Thomas Naiser

1

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

Oliver Ehler

2

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

Jona Kayser

3

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

Timo Mai

4

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

Wolfgang Michel

5

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

Albrecht Ott

6

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

publication date

13 May 2008

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

BMC Biotechnology

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

8

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

48

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

DNA multiplex hybridization on microarrays and thermodynamic stability in solution: a direct comparison

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2435543

21 June 2018

Experimental optimization of probe length to increase the sequence specificity of high-density oligonucleotide microarrays.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2435543

21 June 2018

Designing siRNA that distinguish between genes that differ by a single nucleotide

1 reference

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21 June 2018

Tests of rRNA hybridization to microarrays suggest that hybridization characteristics of oligonucleotide probes for species discrimination cannot be predicted

1 reference

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21 June 2018

On-chip non-equilibrium dissociation curves and dissociation rate constants as methods to assess specificity of oligonucleotide probes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2435543

21 June 2018

Allele-specific RNA interference for neurological disease

1 reference

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21 June 2018

A competitive kinetic model of nucleic acid surface hybridization in the presence of point mutants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2435543

21 June 2018

The thermodynamics of DNA structural motifs

1 reference

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21 June 2018

Validation of a novel, fully integrated and flexible microarray benchtop facility for gene expression profiling.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2435543

21 June 2018

Probe selection for high-density oligonucleotide arrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2435543

21 June 2018

Solving the riddle of the bright mismatches: labeling and effective binding in oligonucleotide arrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2435543

21 June 2018

Dendrimeric coating of glass slides for sensitive DNA microarrays analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2435543

21 June 2018

Oligodeoxyribonucleotide probe accessibility on a three-dimensional DNA microarray surface and the effect of hybridization time on the accuracy of expression ratios

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2435543

21 June 2018

A model of molecular interactions on short oligonucleotide microarrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2435543

21 June 2018

Optimization of single-base-pair mismatch discrimination in oligonucleotide microarrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2435543

21 June 2018

Prioritized selection of oligodeoxyribonucleotide probes for efficient hybridization to RNA transcripts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2435543

21 June 2018

Hybridization of mismatched or partially matched DNA at surfaces

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2435543

21 June 2018

Gene expression analysis using oligonucleotide arrays produced by maskless photolithography

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2435543

21 June 2018

A flexible light-directed DNA chip synthesis gated by deprotection using solution photogenerated acids

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2435543

21 June 2018

Maskless fabrication of light-directed oligonucleotide microarrays using a digital micromirror array

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2435543

21 June 2018

Detection of sickle cell beta S-globin allele by hybridization with synthetic oligonucleotides

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2435543

21 June 2018

Light-directed, spatially addressable parallel chemical synthesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2435543

21 June 2018

Hybridization of synthetic oligodeoxyribonucleotides to ΦX174 DNA: the effect of single base pair mismatch

1 reference

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21 June 2018

Thermodynamic parameters for an expanded nearest-neighbor model for the formation of RNA duplexes with single nucleotide bulges

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2435543

31 October 2018

The effect of base sequence on the stability of RNA and DNA single base bulges.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2435543

31 October 2018

Nearest neighbor thermodynamic parameters for internal G.A mismatches in DNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/18477387

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Influence of neighboring base pairs on the stability of single base bulges and base pairs in a DNA fragment

1 reference

https://pubmed.ncbi.nlm.nih.gov/18477387

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Thermodynamics and NMR of internal G.T mismatches in DNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/18477387

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Thermodynamics of single mismatches in RNA duplexes

1 reference

https://pubmed.ncbi.nlm.nih.gov/18477387

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Thermodynamics-structure relationship of single mismatches in RNA/DNA duplexes

1 reference

https://pubmed.ncbi.nlm.nih.gov/18477387

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nearest-neighbor thermodynamics and NMR of DNA sequences with internal A.A, C.C, G.G, and T.T mismatches

1 reference

https://pubmed.ncbi.nlm.nih.gov/18477387

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/1472-6750-8-48

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

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0 references

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

ResearchGate publication ID

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