(Q34622851)

English

Tests of rRNA hybridization to microarrays suggest that hybridization characteristics of oligonucleotide probes for species discrimination cannot be predicted

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scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

Tests of rRNA hybridization to microarrays suggest that hybridization characteristics of oligonucleotide probes for species discrimination cannot be predicted (English)

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

8

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

object named as

Peter A Noble

2

0 references

Tomislav Domazet-Lošo

3

object named as

Tomislav Domazet-Loso

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

author name string

Alex Pozhitkov

1

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

Arne W Nolte

4

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

Rainer Sonnenberg

5

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

Peer Staehler

6

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

Markus Beier

7

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

language of work or name

0 references

publication date

17 May 2006

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

Nucleic Acids Research

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

34

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

9

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

e66

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

Evaluation of gel-pad oligonucleotide microarray technology by using artificial neural networks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1463897

7 July 2018

Reverse taxonomy: an approach towards determining the diversity of meiobenthic organisms based on ribosomal RNA signature sequences

1 reference

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7 July 2018

Array-based analysis of genomic DNA methylation patterns of the tumour suppressor gene p16INK4A promoter in colon carcinoma cell lines

1 reference

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7 July 2018

Rapid quantification and taxonomic classification of environmental DNA from both prokaryotic and eukaryotic origins using a microarray.

1 reference

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7 July 2018

Design of nucleic acid sequences for DNA computing based on a thermodynamic approach

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1463897

7 July 2018

The European ribosomal RNA database

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1463897

7 July 2018

Validation of a novel, fully integrated and flexible microarray benchtop facility for gene expression profiling.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1463897

7 July 2018

Probe selection for high-density oligonucleotide arrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1463897

7 July 2018

Solving the riddle of the bright mismatches: labeling and effective binding in oligonucleotide arrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1463897

7 July 2018

Thermodynamic calculations and statistical correlations for oligo-probes design.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1463897

7 July 2018

Mfold web server for nucleic acid folding and hybridization prediction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1463897

7 July 2018

Modeling of DNA microarray data by using physical properties of hybridization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1463897

7 July 2018

A model of molecular interactions on short oligonucleotide microarrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1463897

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Sequence versus Structure for the Direct Detection of 16S rRNA on Planar Oligonucleotide Microarrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1463897

7 July 2018

Optimization of single-base-pair mismatch discrimination in oligonucleotide microarrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1463897

7 July 2018

Prioritized selection of oligodeoxyribonucleotide probes for efficient hybridization to RNA transcripts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1463897

7 July 2018

Coulomb blockage of hybridization in two-dimensional DNA arrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1463897

7 July 2018

Multiple label-free biodetection and quantitative DNA-binding assays on a nanomechanical cantilever array.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1463897

7 July 2018

The effect of surface probe density on DNA hybridization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1463897

7 July 2018

Single-base-pair discrimination of terminal mismatches by using oligonucleotide microarrays and neural network analyses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1463897

7 July 2018

Direct detection of 16S rRNA in soil extracts by using oligonucleotide microarrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1463897

7 July 2018

Gene expression analysis by massively parallel signature sequencing (MPSS) on microbead arrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1463897

7 July 2018

In vitro cloning of complex mixtures of DNA on microbeads: physical separation of differentially expressed cDNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1463897

7 July 2018

Application of neural computing methods for interpreting phospholipid fatty acid profiles of natural microbial communities

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1463897

7 July 2018

Predicting oligonucleotide affinity to nucleic acid targets

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1463897

7 July 2018

Calculating thermodynamic data for transitions of any molecularity from equilibrium melting curves

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1463897

7 July 2018

Sequence-specific identification of 18 pathogenic microorganisms using microarray technology.

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKL133

21 January 2018

Optimization of an oligonucleotide microchip for microbial identification studies: a non-equilibrium dissociation approach.

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKL133

21 January 2018

Electronic microarray analysis of 16S rDNA amplicons for bacterial detection.

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKL133

21 January 2018

Consecutive analysis of bacterial PCR samples on a single electronic microarray

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKL133

21 January 2018

Application and validation of DNA microarrays for the 16S rRNA-based analysis of marine bacterioplankton.

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKL133

21 January 2018

DNA taxonomy of a neglected animal phylum: an unexpected diversity of tardigrades.

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKL133

21 January 2018

Brush effects on DNA chips: thermodynamics, kinetics, and design guidelines

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKL133

21 January 2018

Stochastic models inspired by hybridization theory for short oligonucleotide arrays.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1463897

26 October 2018

Thermodynamics-structure relationship of single mismatches in RNA/DNA duplexes

1 reference

https://pubmed.ncbi.nlm.nih.gov/16707658

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Improved nearest-neighbor parameters for predicting DNA duplex stability

1 reference

https://pubmed.ncbi.nlm.nih.gov/16707658

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Thermodynamics of single mismatches in RNA duplexes

1 reference

https://pubmed.ncbi.nlm.nih.gov/16707658

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/NAR/GKL133

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

ResearchGate publication ID

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