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Systems approaches to identifying gene regulatory networks in plants.
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Europe PubMed Central
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2739012
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10 January 2020
review article
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title
Systems approaches to identifying gene regulatory networks in plants
(English)
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Europe PubMed Central
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2739012
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18616425%20AND%20SRC:MED&resulttype=core&format=json
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10 January 2020
author
Siobhan M Brady
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2
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Europe PubMed Central
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2739012
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18616425%20AND%20SRC:MED&resulttype=core&format=json
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10 January 2020
Philip N Benfey
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Philip N Benfey
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Europe PubMed Central
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2739012
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10 January 2020
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Terri A Long
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Europe PubMed Central
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2739012
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10 January 2020
publication date
1 January 2008
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10 January 2020
published in
Annual Review of Cell and Developmental Biology
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Europe PubMed Central
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2739012
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18616425%20AND%20SRC:MED&resulttype=core&format=json
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10 January 2020
volume
24
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Europe PubMed Central
PMC publication ID
2739012
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18616425%20AND%20SRC:MED&resulttype=core&format=json
retrieved
10 January 2020
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81-103
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Europe PubMed Central
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2739012
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10 January 2020
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Laser-capture microdissection, a tool for the global analysis of gene expression in specific plant cell types: identification of genes expressed differentially in epidermal cells or vascular tissues of maize
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A high-throughput Arabidopsis reverse genetics system
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A genomic regulatory network for development
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21 June 2018
Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739012
retrieved
21 June 2018
Arabidopsis basic leucine zipper transcription factors involved in an abscisic acid-dependent signal transduction pathway under drought and high-salinity conditions.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739012
retrieved
21 June 2018
Mapping chromosomal proteins in vivo by formaldehyde-crosslinked-chromatin immunoprecipitation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739012
retrieved
21 June 2018
Isolation of a novel class of bZIP transcription factors that interact with ABA-responsive and embryo-specification elements in the Dc3 promoter using a modified yeast one-hybrid system
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739012
retrieved
21 June 2018
The war of the whorls: genetic interactions controlling flower development
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739012
retrieved
21 June 2018
Quantitative proteomics in plants: choices in abundance.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739012
retrieved
31 October 2018
A high-resolution root spatiotemporal map reveals dominant expression patterns.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739012
retrieved
31 October 2018
Auxin transport is sufficient to generate a maximum and gradient guiding root growth.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739012
retrieved
31 October 2018
MNU-induced mutant pools and high performance TILLING enable finding of any gene mutation in rice
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739012
retrieved
31 October 2018
A central integrator of transcription networks in plant stress and energy signalling.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739012
retrieved
31 October 2018
Towards the plant metabolome and beyond.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739012
retrieved
31 October 2018
Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739012
retrieved
31 October 2018
A complex oscillating network of signaling genes underlies the mouse segmentation clock.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739012
retrieved
31 October 2018
Generation of a flanking sequence-tag database for activation-tagging lines in japonica rice.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739012
retrieved
31 October 2018
Metabolomic networks in plants: Transitions from pattern recognition to biological interpretation.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739012
retrieved
31 October 2018
Cell type-specific expression profiling in plants via cell sorting of protoplasts from fluorescent reporter lines
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739012
retrieved
31 October 2018
Comprehensive interaction map of the Arabidopsis MADS Box transcription factors.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739012
retrieved
31 October 2018
A gene regulatory network model for cell-fate determination during Arabidopsis thaliana flower development that is robust and recovers experimental gene expression profiles.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739012
retrieved
31 October 2018
Gene and enhancer trap tagging of vascular-expressed genes in poplar trees.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739012
retrieved
31 October 2018
An Arabidopsis thaliana T-DNA mutagenized population (GABI-Kat) for flanking sequence tag-based reverse genetics
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739012
retrieved
31 October 2018
Distribution and characterization of over 1000 T-DNA tags in rice genome.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739012
retrieved
31 October 2018
Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739012
retrieved
31 October 2018
Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739012
retrieved
31 October 2018
Genetic control of flower morphogenesis in Arabidopsis thaliana: a logical analysis.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739012
retrieved
31 October 2018
Protein-protein interactions of tandem affinity purification-tagged protein kinases in rice
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739012
retrieved
31 October 2018
Specific Effects of MicroRNAs on the Plant Transcriptome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739012
retrieved
31 October 2018
TRICHOMELESS1 regulates trichome patterning by suppressing GLABRA1 in Arabidopsis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739012
retrieved
10 December 2018
Quantitative modeling of Arabidopsis development
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/18616425
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Measuring multiple fluxes through plant metabolic networks
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/18616425
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Dynamics of the genetic regulatory network for Arabidopsis thaliana flower morphogenesis
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/18616425
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
TILLING without a plough: a new method with applications for reverse genetics
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/18616425
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
A rice gene activation/knockout mutant resource for high throughput functional genomics
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/18616425
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Genome sequencing. The greening of plant genomics
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/18616425
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1146/ANNUREV.CELLBIO.24.110707.175408
1 reference
stated in
Europe PubMed Central
PMC publication ID
2739012
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18616425%20AND%20SRC:MED&resulttype=core&format=json
retrieved
10 January 2020
Fatcat ID
release_scfzauioefcu5hijfot5shqjvq
1 reference
stated in
Fatcat
reference URL
https://api.fatcat.wiki/v0/release/scfzauioefcu5hijfot5shqjvq
retrieved
24 November 2022
based on heuristic
mapped directly with Wikidata item
PMC publication ID
2739012
1 reference
stated in
Europe PubMed Central
PMC publication ID
2739012
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18616425%20AND%20SRC:MED&resulttype=core&format=json
retrieved
10 January 2020
PubMed publication ID
18616425
1 reference
stated in
Europe PubMed Central
PMC publication ID
2739012
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18616425%20AND%20SRC:MED&resulttype=core&format=json
retrieved
10 January 2020
ResearchGate publication ID
5235080
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