(Q33352295)

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Revealing the uncultivated majority: combining DNA stable-isotope probing, multiple displacement amplification and metagenomic analyses of uncultivated Methylocystis in acidic peatlands.

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10 January 2020

Revealing the uncultivated majority: combining DNA stable-isotope probing, multiple displacement amplification and metagenomic analyses of uncultivated Methylocystis in acidic peatlands (English)

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Europe PubMed Central

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10 January 2020

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based on heuristic

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based on heuristic

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10 January 2020

Niall P McNamara

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10 January 2020

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10 January 2020

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Marc G Dumont

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10 January 2020

Josh D Neufeld

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10 January 2020

Levente Bodrossy

4

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10 January 2020

Nancy Stralis-Pavese

5

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10 January 2020

Maria J I Briones

8

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10 January 2020

J Colin Murrell

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10 January 2020

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10 July 2008

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10 January 2020

Environmental Microbiology

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10 January 2020

10

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10 January 2020

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10 January 2020

2609-2622

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10 January 2020

Whole-genome re-sequencing

1 reference

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Something from (almost) nothing: the impact of multiple displacement amplification on microbial ecology

1 reference

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Development and validation of a diagnostic microbial microarray for methanotrophs

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Nutrient amendments in soil DNA stable isotope probing experiments reduce the observed methanotroph diversity

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Identification of active methanotrophs in a landfill cover soil through detection of expression of 16S rRNA and functional genes.

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Genome of Methylobacillus flagellatus, molecular basis for obligate methylotrophy, and polyphyletic origin of methylotrophy

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Detection and enumeration of methanotrophs in acidic Sphagnum peat by 16S rRNA fluorescence in situ hybridization, including the use of newly developed oligonucleotide probes for Methylocella palustris.

1 reference

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21 January 2018

Methylocapsa acidiphila gen. nov., sp. nov., a novel methane-oxidizing and dinitrogen-fixing acidophilic bacterium from Sphagnum bog.

1 reference

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21 January 2018

Phylogenetic analysis and in situ identification of bacteria community composition in an acidic Sphagnum peat bog

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21 January 2018

Methylocystis heyeri sp. nov., a novel type II methanotrophic bacterium possessing 'signature' fatty acids of type I methanotrophs.

1 reference

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Stable isotope probing - linking microbial identity to function

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Identification of a complete methane monooxygenase operon from soil by combining stable isotope probing and metagenomic analysis

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Methane oxidation by an extremely acidophilic bacterium of the phylum Verrucomicrobia.

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Diversity of oxygenase genes from methane- and ammonia-oxidizing bacteria in the Eastern Snake River Plain aquifer

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21 January 2018

Stable-isotope probing of DNA: insights into the function of uncultivated microorganisms from isotopically labeled metagenomes

1 reference

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21 January 2018

Molecular analysis of the pmo (particulate methane monooxygenase) operons from two type II methanotrophs.

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21 January 2018

The importance of culturing bacterioplankton in the 'omics' age.

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21 January 2018

Metagenomics: application of genomics to uncultured microorganisms

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21 January 2018

Evidence that participate methane monooxygenase and ammonia monooxygenase may be evolutionarily related

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21 January 2018

Analysis of methanotrophic bacteria in Movile Cave by stable isotope probing.

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Methane oxidation at 55 degrees C and pH 2 by a thermoacidophilic bacterium belonging to the Verrucomicrobia phylum

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Methane-oxidizing bacteria in a Finnish raised mire complex: effects of site fertility and drainage

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Improved culturability of soil bacteria and isolation in pure culture of novel members of the divisions Acidobacteria, Actinobacteria, Proteobacteria, and Verrucomicrobia.

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Isolating "uncultivable" microorganisms in pure culture in a simulated natural environment

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21 January 2018

Fluorescence in situ hybridization-flow cytometry-cell sorting-based method for separation and enrichment of type I and type II methanotroph populations

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Tapping into microbial diversity.

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Single-cell genomic sequencing using Multiple Displacement Amplification

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Mechanism of chimera formation during the Multiple Displacement Amplification reaction

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Cultivation of recalcitrant microbes: cells are alive, well and revealing their secrets in the 21st century laboratory

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Molecular Ecological Analysis of Methanogens and Methanotrophs in Blanket Bog Peat.

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Nanoliter reactors improve multiple displacement amplification of genomes from single cells

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Dissecting biological "dark matter" with single-cell genetic analysis of rare and uncultivated TM7 microbes from the human mouth

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Metagenomic analysis of two enhanced biological phosphorus removal (EBPR) sludge communities

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Identification of the functionally active methanotroph population in a peat soil microcosm by stable-isotope probing

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