(Q21146404)

inferred from title

whole genome sequencing

1 reference

38

Jonathan A Eisen

Jonathan A

Eisen

1 reference

17 August 2022

18

Jacques Ravel

Jacques

Ravel

1 reference

17 August 2022

Martin Wu

14

Martin

Wu

1 reference

17 August 2022

John F Heidelberg

15

John F

Heidelberg

1 reference

17 August 2022

William C Nelson

27

William C

Nelson

1 reference

17 August 2022

Steven L Salzberg

24

Steven L

Salzberg

1 reference

17 August 2022

Claire M Fraser

36

Claire M

Fraser

1 reference

17 August 2022

Ian T Paulsen

16

Ian T

Paulsen

1 reference

17 August 2022

1

Naomi Ward

Naomi

Ward

1 reference

17 August 2022

22

Robert T DeBoy

Robert T

DeBoy

1 reference

17 August 2022

28

Robert J Dodson

Robert J

Dodson

1 reference

17 August 2022

6

A Scott Durkin

A Scott

Durkin

1 reference

17 August 2022

5

Hoda Khouri

Hoda

Khouri

1 reference

17 August 2022

12

Karen E Nelson

Karen E

Nelson

1 reference

17 August 2022

20

Qinghu Ren

Qinghu

Ren

1 reference

17 August 2022

17

Derrick Fouts

Derrick

Fouts

1 reference

17 August 2022

23

Rekha

Seshadri

Rekha Seshadri

1 reference

17 August 2022

34

Terry

Utterback

Terry Utterback

1 reference

17 August 2022

35

Tamara V

Feldblyum

Tamara V Feldblyum

1 reference

17 August 2022

19

Hervé

Tettelin

Hervé Tettelin

1 reference

17 August 2022

30

Ingeborg

Holt

Ingeborg Holt

1 reference

17 August 2022

8

Lingxia

Jiang

Lingxia Jiang

1 reference

17 August 2022

9

David

Scanlan

David Scanlan

1 reference

17 August 2022

13

Barbara

Methé

Barbara Methé

1 reference

17 August 2022

7

George

Dimitrov

George Dimitrov

1 reference

17 August 2022

Øivind Larsen

2

Øivind

Larsen

1 reference

17 August 2022

James Sakwa

3

James

Sakwa

1 reference

17 August 2022

Live Bruseth

4

Live

Bruseth

1 reference

17 August 2022

Katherine H Kang

10

Katherine H

Kang

1 reference

17 August 2022

Matt Lewis

11

Matt

Lewis

1 reference

17 August 2022

Tim Read

21

Tim

Read

1 reference

17 August 2022

Harald B Jensen

25

Harald B

Jensen

1 reference

17 August 2022

Nils Kåre Birkeland

26

Nils Kåre

Birkeland

1 reference

17 August 2022

Svenn H Grindhaug

29

Svenn H

Grindhaug

1 reference

17 August 2022

Ingvar Eidhammer

31

Ingvar

Eidhammer

1 reference

17 August 2022

Inge Jonasen

32

Inge

Jonasen

1 reference

17 August 2022

Susan Vanaken

33

Susan

Vanaken

1 reference

17 August 2022

Johan R Lillehaug

37

Johan R

Lillehaug

1 reference

Creative Commons Attribution 4.0 International

17 August 2022

language of work or name

English

0 references

publication date

October 2004

0 references

published in

PLOS Biology

0 references

volume

2

0 references

issue

10

0 references

page(s)

e303

0 references

copyright license

start time

21 September 2004

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

MUMmer

object named as

MUMmer

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

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Genome sequence of the cyanobacterium Prochlorococcus marinus SS120, a nearly minimal oxyphototrophic genome

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Complete genome sequence of the ammonia-oxidizing bacterium and obligate chemolithoautotroph Nitrosomonas europaea

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The membrane-associated form of methane mono-oxygenase from Methylococcus capsulatus (Bath) is a copper/iron protein

19 March 2017

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The complete genome sequence of Chlorobium tepidum TLS, a photosynthetic, anaerobic, green-sulfur bacterium

19 March 2017

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The complete genome of hyperthermophile Methanopyrus kandleri AV19 and monophyly of archaeal methanogens

19 March 2017

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19 March 2017

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Glutamyl-tRNA(Gln) amidotransferase in Deinococcus radiodurans may be confined to asparagine biosynthesis

19 March 2017

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A phylogenomic study of the MutS family of proteins

19 March 2017

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Microbial gene identification using interpolated Markov models

19 March 2017

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Complete genome sequence of Methanobacterium thermoautotrophicum deltaH: functional analysis and comparative genomics

19 March 2017

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Metabolic relationships between pyridoxine (vitamin B6) and serine biosynthesis in Escherichia coli K-12

19 March 2017

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Complete Genome Sequence of a Virulent Isolate of Streptococcus pneumoniae

19 March 2017

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19 March 2017

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Crystal structures of the soluble methane monooxygenase hydroxylase from Methylococcus capsulatus (Bath) demonstrating geometrical variability at the dinuclear iron active site

19 March 2017

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Complete Genome Sequence of the Methanogenic Archaeon, Methanococcus jannaschii

19 March 2017

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ThrH, a homoserine kinase isozyme with in vivo phosphoserine phosphatase activity in Pseudomonas aeruginosa

19 March 2017

1 reference

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Phylogenomics: improving functional predictions for uncharacterized genes by evolutionary analysis

19 March 2017

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Genetic basis of bacteriophage HK97 prohead assembly

19 March 2017

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Assigning protein functions by comparative genome analysis: Protein phylogenetic profiles

19 March 2017

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Asymmetric substitution patterns in the two DNA strands of bacteria

7 April 2017

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A challenge for 21st century molecular biology and biochemistry: what are the causes of obligate autotrophy and methanotrophy?

7 April 2017

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Multiple formate dehydrogenase enzymes in the facultative methylotroph Methylobacterium extorquens AM1 are dispensable for growth on methanol

12 September 2017

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Conditional protein splicing: a new tool to control protein structure and function in vitro and in vivo.

12 September 2017

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Phylogenomics: intersection of evolution and genomics

12 September 2017

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Methylotrophy in Methylobacterium extorquens AM1 from a genomic point of view

12 September 2017

1 reference

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The structure and mechanism of methanol dehydrogenase

12 September 2017

1 reference

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Molecular analysis of the multiple GroEL proteins of Chlamydiae

12 September 2017

1 reference

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The deoxyxylulose phosphate pathway of isoprenoid biosynthesis: studies on the mechanisms of the reactions catalyzed by IspG and IspH protein

12 September 2017

1 reference

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Cofactor-dependent pathways of formaldehyde oxidation in methylotrophic bacteria.

12 September 2017

1 reference

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Phylogenetic analysis and gene functional predictions: phylogenomics in action

12 September 2017

1 reference

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Membrane-associated quinoprotein formaldehyde dehydrogenase from Methylococcus capsulatus Bath.

12 September 2017

1 reference

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A single amidotransferase forms asparaginyl-tRNA and glutaminyl-tRNA in Chlamydia trachomatis

12 September 2017

1 reference

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Microbial genes in the human genome: lateral transfer or gene loss?

12 September 2017

1 reference

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Molecular biology of the plastidic phosphorylated serine biosynthetic pathway in Arabidopsis thaliana

12 September 2017

1 reference

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Expression of individual copies of Methylococcus capsulatus bath particulate methane monooxygenase genes

12 September 2017

1 reference

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Molecular biology and regulation of methane monooxygenase

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

Regulation of expression of methane monooxygenases by copper ions.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

CopA: An Escherichia coli Cu(I)-translocating P-type ATPase.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

Distribution of tetrahydromethanopterin-dependent enzymes in methylotrophic bacteria and phylogeny of methenyl tetrahydromethanopterin cyclohydrolases

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

Structure, assembly and regulation of expression of capsules in Escherichia coli

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

High-molecular-mass multi-c-heme cytochromes from Methylococcus capsulatus bath.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

Copper-binding compounds from Methylosinus trichosporium OB3b

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

Isolation of copper biochelates from Methylosinus trichosporium OB3b and soluble methane monooxygenase mutants.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

Glu-tRNAGln amidotransferase: a novel heterotrimeric enzyme required for correct decoding of glutamine codons during translation

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

12 September 2017

Methanotrophic bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

A new strategy for genome sequencing

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

Membrane-associated methane monooxygenase from Methylococcus capsulatus (Bath)

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

The soluble methane mono-oxygenase of Methylococcus capsulatus (Bath). Its ability to oxygenate n-alkanes, n-alkenes, ethers, and alicyclic, aromatic and heterocyclic compounds

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

Lactose genes fused to exogenous promoters in one step using a Mu-lac bacteriophage: in vivo probe for transcriptional control sequences

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

Phospholipid composition of methane-utilizing bacteria

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

Purification and Properties of an NAD(P)+-linked Formaldehyde Dehydrogenase from Methylococcus capsulatus (Bath)

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

Variants of the Obligate Methanotroph Isolate 761M Capable of Growth on Glucose in the Absence of Methane.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

Molecular analysis of the copper-transporting efflux system CusCFBA of Escherichia coli

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

Genetics of the serine cycle in Methylobacterium extorquens AM1: identification, sequence, and mutation of three new genes involved in C1 assimilation, orf4, mtkA, and mtkB

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

Molecular genetics of methane oxidation

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

The hydrogenases and formate dehydrogenases of Escherichia coli

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

Why OrfY? Characterization of MMOD, a long overlooked component of the soluble methane monooxygenase from Methylococcus capsulatus (Bath).

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

Arrangement of the multicopy H+-translocating subunit c in the membrane sector of the Escherichia coli F1F0 ATP synthase

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

The particulate methane monooxygenase from methylococcus capsulatus (Bath) is a novel copper-containing three-subunit enzyme. Isolation and characterization

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

The methanol oxidation genes mxaFJGIR (S) ACKLD in Methylobacterium extorquens

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

The carbon assimilation pathways of Methylococcus capsulatus, Pseudomonas methanica and Methylosinus trichosporium (OB3B) during growth on methane

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

The methane monooxygenase gene cluster of Methylococcus capsulatus (Bath).

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

Formaldehyde dehydrogenase preparations from Methylococcus capsulatus (Bath) comprise methanol dehydrogenase and methylene tetrahydromethanopterin dehydrogenase

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

Synthesis of adenoviral targeting molecules by intein-mediated protein ligation

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

Genes involved in the copper-dependent regulation of soluble methane monooxygenase of Methylococcus capsulatus (Bath): cloning, sequencing and mutational analysis

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

Expression of the class 1 outer-membrane protein of Neisseria meningitidis in Escherichia coli and purification using a self-cleavable affinity tag.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

Bacteriophage Mu genome sequence: analysis and comparison with Mu-like prophages in Haemophilus, Neisseria and Deinococcus.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

The ribulose-1,5-bisphosphate carboxylase/oxygenase gene cluster of Methylococcus capsulatus (Bath)

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

Detection and localization of two hydrogenases in Methylococcus capsulatus (Bath) and their potential role in methane metabolism.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

Molecular characterization of structural genes coding for a membrane bound hydrogenase in Methylococcus capsulatus (Bath).

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

Characterization of the formyltransferase from Methylobacterium extorquens AM1.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

A dual-specific Glu-tRNA(Gln) and Asp-tRNA(Asn) amidotransferase is involved in decoding glutamine and asparagine codons in Acidithiobacillus ferrooxidans.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

The Comprehensive Microbial Resource.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

The heterotrimeric Thermus thermophilus Asp-tRNA(Asn) amidotransferase can also generate Gln-tRNA(Gln).

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

Optimized multiplex PCR: efficiently closing a whole-genome shotgun sequencing project.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

Role of multiple gene copies in particulate methane monooxygenase activity in the methane-oxidizing bacterium Methylococcus capsulatus Bath

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

Skewed oligomers and origins of replication.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

The nature of the copper ions in the membranes containing the particulate methane monooxygenase from Methylococcus capsulatus (Bath).

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

The role of copper in the pMMO of Methylococcus capsulatus bath: a structural vs. catalytic function

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517821

Evidence for the synthesis of the multi-positional isomers of monounsaturated fatty acid in Methylococcus capsusatus by the anaerobic pathway

29 November 2018

1 reference

12 December 2020

Erratum to "The methanol oxidation genes mxaFJGIR (S) ACKLD in Methylobacterium extorquens" [FEMS Microbiol. Lett. 146 (1997) 31-38]

1 reference

12 December 2020

Enrichment, isolation and some properties of methane-utilizing bacteria

1 reference

12 December 2020

Sequencing and analysis of the Mmethylococcus capsulatus (Bath) solublemethane monooxygenase genes

1 reference

12 December 2020

A low-molecular-mass protein from Methylococcus capsulatus (Bath) is responsible for the regulation of formaldehyde dehydrogenase activity in vitro

1 reference

12 December 2020

Control of copper homeostasis in Escherichia coli by a P-type ATPase, CopA, and a MerR-like transcriptional activator, CopR

1 reference

12 December 2020

Copper homeostasis in Enterococcus hirae

1 reference

12 December 2020

Copper-dependent reciprocal transcriptional regulation of methane monooxygenase genes in Methylococcus capsulatus and Methylosinus trichosporium

1 reference

12 December 2020

The effects of growth temperature on the methyl sterol and phospholipid fatty acid composition of Methylococcus capsulatus (Bath)

1 reference

12 December 2020

Aminoacyl-tRNA synthesis in Archaea

1 reference

12 December 2020

Cloning of nitrogenase structural genes from the obligate methanotroph Methylococcus capsulatus (Bath)

1 reference

12 December 2020

DjlA is a third DnaK co-chaperone of Escherichia coli, and DjlA-mediated induction of colanic acid capsule requires DjlA-DnaK interaction

1 reference

12 December 2020

Steroids and Squalene in Methylococcus capsulatus grown on Methane

1 reference

12 December 2020

Climate effects of atmospheric methane

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.0020303

7 January 2021

inferred from DOI database lookup

Symbiosis of methylotrophic bacteria and deep-sea mussels

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.0020303

7 January 2021

inferred from DOI database lookup

Consumption of atmospheric methane by desert soils

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.0020303

7 January 2021

inferred from DOI database lookup

Identifiers

DOI

10.1371/JOURNAL.PBIO.0020303

1 reference

1 reference

1 reference

1 reference