(Q33355806)

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High-resolution array copy number analyses for detection of deletion, gain, amplification and copy-neutral LOH in primary neuroblastoma tumors: four cases of homozygous deletions of the CDKN2A gene

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Europe PubMed Central

PubMed publication ID

26 July 2017

High-resolution array copy number analyses for detection of deletion, gain, amplification and copy-neutral LOH in primary neuroblastoma tumors: four cases of homozygous deletions of the CDKN2A gene (English)

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Europe PubMed Central

PubMed publication ID

26 July 2017

1 reference

based on heuristic

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based on heuristic

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Helena Carén

1

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Jonas Abrahamsson

object named as

Jonas Abrahamsson

6

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Tommy Martinsson

object named as

Tommy Martinsson

8

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object named as

Per Kogner

7

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author name string

Jennie Erichsen

2

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

Linda Olsson

3

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Europe PubMed Central

PubMed publication ID

26 July 2017

Charlotta Enerbäck

4

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Europe PubMed Central

PubMed publication ID

26 July 2017

Rose-Marie Sjöberg

5

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Europe PubMed Central

PubMed publication ID

26 July 2017

language of work or name

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publication date

29 July 2008

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Europe PubMed Central

PubMed publication ID

26 July 2017

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Europe PubMed Central

PubMed publication ID

26 July 2017

9

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Europe PubMed Central

PubMed publication ID

26 July 2017

353

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

Highly sensitive method for genomewide detection of allelic composition in nonpaired, primary tumor specimens by use of affymetrix single-nucleotide-polymorphism genotyping microarrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527340

21 June 2018

Genome wide measurement of DNA copy number changes in neuroblastoma: dissecting amplicons and mapping losses, gains and breakpoints

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527340

21 June 2018

High resolution tiling-path BAC array deletion mapping suggests commonly involved 3p21-p22 tumor suppressor genes in neuroblastoma and more frequent tumors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527340

21 June 2018

High-resolution analysis of chromosomal breakpoints and genomic instability identifies PTPRD as a candidate tumor suppressor gene in neuroblastoma

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527340

21 June 2018

Analysis of chromosome breakpoints in neuroblastoma at sub-kilobase resolution using fine-tiling oligonucleotide array CGH.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527340

21 June 2018

A robust algorithm for copy number detection using high-density oligonucleotide single nucleotide polymorphism genotyping arrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527340

21 June 2018

Methylation of tumor suppressor genes p16(INK4a), p27(Kip1) and E-cadherin in carcinogenesis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527340

21 June 2018

Measurement and relevance of neuroblastoma DNA copy number changes in the post-genome era.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527340

21 June 2018

High-resolution cDNA microarray-based comparative genomic hybridization analysis in neuroblastoma

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527340

21 June 2018

Application of microarray-based technology to neuroblastoma

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527340

21 June 2018

INK4a/ARF: a multifunctional tumor suppressor locus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527340

21 June 2018

cDNA array-CGH profiling identifies genomic alterations specific to stage and MYCN-amplification in neuroblastoma

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527340

21 June 2018

Combined subtractive cDNA cloning and array CGH: an efficient approach for identification of overexpressed genes in DNA amplicons

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527340

21 June 2018

Homozygous deletion and expression of PTEN and DMBT1 in human primary neuroblastoma and cell lines

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527340

21 June 2018

The t(1;3) breakpoint-spanning genes LSAMP and NORE1 are involved in clear cell renal cell carcinomas

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527340

21 June 2018

Epigenetic inactivation of the candidate 3p21.3 suppressor gene BLU in human cancers.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527340

21 June 2018

Neuroblastoma: biological insights into a clinical enigma

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527340

21 June 2018

Expression, cellular distribution and protein binding of the glioma amplified sequence (GAS41), a highly conserved putative transcription factor

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527340

21 June 2018

Three chromosomal rearrangements in neuroblastoma cluster within a 300-kb region on 1p36.1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527340

21 June 2018

Regulation of p53 function

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527340

21 June 2018

p16(MTS-1/CDKN2/INK4a) in cancer progression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527340

21 June 2018

Homozygous deletion of CDKN2A (p16INK4a/p14ARF) but not within 1p36 or at other tumor suppressor loci in neuroblastoma

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527340

21 June 2018

Identification and characterization of a 500-kb homozygously deleted region at 1p36.2-p36.3 in a neuroblastoma cell line

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527340

21 June 2018

Hypermethylation-associated inactivation of p14(ARF) is independent of p16(INK4a) methylation and p53 mutational status

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527340

21 June 2018

Mutations of the p53 gene are involved in Ewing's sarcomas but not in neuroblastomas.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527340

21 June 2018

A region of consistent deletion in neuroblastoma maps within human chromosome 1p36.2-36.3

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527340

21 June 2018

Identification of two distinct chromosome 12-derived amplification units in neuroblastoma cell line NGP

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527340

21 June 2018

Amplified DNA with limited homology to myc cellular oncogene is shared by human neuroblastoma cell lines and a neuroblastoma tumour

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527340

21 June 2018

Human neuroblastomas and abnormalities of chromosomes 1 and 17.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527340

21 June 2018

Amplification of a gene encoding a p53-associated protein in human sarcomas

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527340

21 June 2018

Chromosomal aberrations in human neuroblastomas

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527340

21 June 2018

Identification of 2 putative critical segments of 17q gain in neuroblastoma through integrative genomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527340

31 October 2018

The IgLON family in epithelial ovarian cancer: expression profiles and clinicopathologic correlates.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527340

31 October 2018

PPM1D is a potential target for 17q gain in neuroblastoma

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527340

31 October 2018

RASSF1A promoter region CpG island hypermethylation in phaeochromocytomas and neuroblastoma tumours

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527340

31 October 2018

Multicentre analysis of patterns of DNA gains and losses in 204 neuroblastoma tumors: how many genetic subgroups are there?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527340

31 October 2018

Smallest region of overlapping deletion in 1p36 in human neuroblastoma: a 1 Mbp cosmid and PAC contig

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527340

31 October 2018

Genetic alterations of the p14ARF -hdm2-p53 regulatory pathway in breast carcinoma.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527340

31 October 2018

Mutation of the p53 gene in neuroblastoma and its relationship with N-myc amplification.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527340

31 October 2018

Allelic deletion at 11q23 is common in MYCN single copy neuroblastomas

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527340

31 October 2018

Chromosome bands 1p35-36 contain two distinct neuroblastoma tumor suppressor loci, one of which is imprinted

1 reference

https://pubmed.ncbi.nlm.nih.gov/18664255

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comprehensive analysis of chromosome 1p deletions in neuroblastoma

1 reference

https://pubmed.ncbi.nlm.nih.gov/18664255

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Detailed molecular analysis of 1p36 in neuroblastoma

1 reference

https://pubmed.ncbi.nlm.nih.gov/18664255

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Fine mapping of a tumour suppressor candidate gene region in 1p36.2-3, commonly deleted in neuroblastomas and germ cell tumours

1 reference

https://pubmed.ncbi.nlm.nih.gov/18664255

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Homozygous inactivation of NF1 gene in a patient with familial NF1 and disseminated neuroblastoma

1 reference

https://pubmed.ncbi.nlm.nih.gov/18664255

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Frequent loss of heterozygosity on chromosome 14q in neuroblastoma

1 reference

https://pubmed.ncbi.nlm.nih.gov/18664255

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Deletion of chromosome 11 and of 14q sequences in neuroblastoma

1 reference

https://pubmed.ncbi.nlm.nih.gov/18664255

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Absence of p53 gene mutations in primary neuroblastomas

1 reference

https://pubmed.ncbi.nlm.nih.gov/18664255

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Low frequency of the p53 gene mutations in neuroblastoma

1 reference

https://pubmed.ncbi.nlm.nih.gov/18664255

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

There may be two tumor suppressor genes on chromosome arm 1p closely associated with biologically distinct subtypes of neuroblastoma

1 reference

https://pubmed.ncbi.nlm.nih.gov/18664255

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Non-syntenic amplification of MDM2 and MYCN in human neuroblastoma

1 reference

https://pubmed.ncbi.nlm.nih.gov/18664255

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evidence for two tumour suppressor loci on chromosomal bands 1p35–36 involved in neuroblastoma: one probably imprinted, another associated with N-myc amplification

1 reference

https://pubmed.ncbi.nlm.nih.gov/18664255

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Significance of chromosome 1p loss of heterozygosity in neuroblastoma

1 reference

https://pubmed.ncbi.nlm.nih.gov/18664255

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Deletion of chromosome 1p loci and microsatellite instability in neuroblastomas analyzed with short-tandem repeat polymorphisms

1 reference

https://pubmed.ncbi.nlm.nih.gov/18664255

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Allelic loss of chromosome 1p as a predictor of unfavorable outcome in patients with neuroblastoma

1 reference

https://pubmed.ncbi.nlm.nih.gov/18664255

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Homozygous deletion of the neurofibromatosis-1 gene in the tumor of a patient with neuroblastoma

1 reference

https://pubmed.ncbi.nlm.nih.gov/18664255

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Definition and characterization of a region of 1p36.3 consistently deleted in neuroblastoma

1 reference

https://pubmed.ncbi.nlm.nih.gov/18664255

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Oligonucleotide array-based comparative genomic hybridization (aCGH) of 90 neuroblastomas reveals aberration patterns closely associated with relapse pattern and outcome

1 reference

https://pubmed.ncbi.nlm.nih.gov/18664255

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Neuroblastomas have distinct genomic DNA profiles that predict clinical phenotype and regional gene expression

1 reference

https://pubmed.ncbi.nlm.nih.gov/18664255

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification and characterization of DNA imbalances in neuroblastoma by high-resolution oligonucleotide array comparative genomic hybridization

1 reference

https://pubmed.ncbi.nlm.nih.gov/18664255

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Caspase 8 is deleted or silenced preferentially in childhood neuroblastomas with amplification of MYCN

1 reference

https://pubmed.ncbi.nlm.nih.gov/18664255

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/1471-2164-9-353

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

Dimensions Publication ID

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-9-353

9 September 2019

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

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