(Q33356642)

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Comparative analyses of coding and noncoding DNA regions indicate that Acropora (Anthozoa: Scleractina) possesses a similar evolutionary tempo of nuclear vs. mitochondrial genomes as in plants

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scholarly article

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Europe PubMed Central

PubMed publication ID

26 July 2017

Comparative analyses of coding and noncoding DNA regions indicate that Acropora (Anthozoa: Scleractina) possesses a similar evolutionary tempo of nuclear vs. mitochondrial genomes as in plants (English)

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

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Carden C Wallace

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Chaolun Allen Chen

9

object named as

Chaolun Allen Chen

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Europe PubMed Central

PubMed publication ID

26 July 2017

author name string

I-Ping Chen

1

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Europe PubMed Central

PubMed publication ID

26 July 2017

Chung-Yu Tang

2

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Europe PubMed Central

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26 July 2017

Chih-Yung Chiou

3

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Europe PubMed Central

PubMed publication ID

26 July 2017

Jia-Ho Hsu

4

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Europe PubMed Central

PubMed publication ID

26 July 2017

Nuwei Vivian Wei

5

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Europe PubMed Central

PubMed publication ID

26 July 2017

Paul Muir

7

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Europe PubMed Central

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26 July 2017

Henry Wu

8

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26 July 2017

publication date

1 August 2008

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Europe PubMed Central

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26 July 2017

Marine Biotechnology

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Europe PubMed Central

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26 July 2017

11

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Europe PubMed Central

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26 July 2017

1

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Europe PubMed Central

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26 July 2017

141-152

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Europe PubMed Central

PubMed publication ID

26 July 2017

https://scigraph.springernature.com/pub.10.1007/s10126-008-9129-2

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Phylogenetic relationships in the coral family acroporidae, reassessed by inference from mitochondrial genes

1 reference

https://api.crossref.org/works/10.1007%2FS10126-008-9129-2

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Geographic differences in species boundaries among members of the Montastraea annularis complex based on molecular and morphological markers

1 reference

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Reproductive and genetic evidence for a reticulate evolutionary history of mass-spawning corals

1 reference

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21 January 2018

The evolutionary history of the coral genus Acropora (Scleractinia, Cnidaria) based on a mitochondrial and a nuclear marker: reticulation, incomplete lineage sorting, or morphological convergence?

1 reference

https://api.crossref.org/works/10.1007%2FS10126-008-9129-2

21 January 2018

Experimental hybridization and breeding incompatibilities within the mating systems of mass spawning reef corals

1 reference

https://api.crossref.org/works/10.1007%2FS10126-008-9129-2

21 January 2018

The codon Adaptation Index--a measure of directional synonymous codon usage bias, and its potential applications

1 reference

https://pubmed.ncbi.nlm.nih.gov/18670809

12 December 2020

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The complete mitochondrial genomes of needle corals, Seriatopora spp. (Scleractinia: Pocilloporidae): an idiosyncratic atp8, duplicated trnW gene, and hypervariable regions used to determine species phylogenies and recently diverged populations

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12 December 2020

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Regionally isolated populations of an imperiled Caribbean coral, Acropora palmata.

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Mitochondrial DNA sequences of primates: Tempo and mode of evolution

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Universal Primers for Amplification of Mitochondrial Small Subunit Ribosomal RNA-Encoding Gene in Scleractinian Corals

1 reference

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12 December 2020

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DnaSP version 3: an integrated program for molecular population genetics and molecular evolution analysis

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An evaluation of the molecular clock hypothesis using mammalian DNA sequences

1 reference

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MrBayes 3: Bayesian phylogenetic inference under mixed models

1 reference

https://pubmed.ncbi.nlm.nih.gov/18670809

12 December 2020

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No variation and low synonymous substitution rates in coral mtDNA despite high nuclear variation

1 reference

https://pubmed.ncbi.nlm.nih.gov/18670809

12 December 2020

based on heuristic

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Evidence for higher rates of nucleotide substitution in rodents than in man

1 reference

https://pubmed.ncbi.nlm.nih.gov/18670809

12 December 2020

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Naked corals: skeleton loss in Scleractinia

1 reference

https://pubmed.ncbi.nlm.nih.gov/18670809

12 December 2020

based on heuristic

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Plant mitochondrial DNA evolves rapidly in structure, but slowly in sequence

1 reference

https://pubmed.ncbi.nlm.nih.gov/18670809

12 December 2020

based on heuristic

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Replication of animal mitochondrial DNA.

1 reference

https://pubmed.ncbi.nlm.nih.gov/18670809

12 December 2020

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THE BOTTLENECK EFFECT AND GENETIC VARIABILITY IN POPULATIONS

1 reference

https://pubmed.ncbi.nlm.nih.gov/18670809

12 December 2020

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Evolutionary aspects of calmodulin

1 reference

https://pubmed.ncbi.nlm.nih.gov/18670809

12 December 2020

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Assessment of methods for amino acid matrix selection and their use on empirical data shows that ad hoc assumptions for choice of matrix are not justified

1 reference

https://pubmed.ncbi.nlm.nih.gov/18670809

12 December 2020

based on heuristic

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RELATIONSHIPS BETWEEN INFERRED LEVELS OF GENE FLOW AND GEOGRAPHIC DISTANCE IN A PHILOPATRIC CORAL, BALANOPHYLLIA ELEGANS.

1 reference

https://pubmed.ncbi.nlm.nih.gov/18670809

12 December 2020

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Divergence in proteins, mitochondrial DNA, and reproductive compatibility across the isthmus of Panama

1 reference

https://pubmed.ncbi.nlm.nih.gov/18670809

12 December 2020

based on heuristic

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Examining rates and patterns of nucleotide substitution in plants

1 reference

https://pubmed.ncbi.nlm.nih.gov/18670809

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Analysis of Acropora muricata calmodulin (CaM) indicates that scleractinian corals possess the ancestral exon/intron organization of the eumetazoan CaM gene

1 reference

https://pubmed.ncbi.nlm.nih.gov/18670809

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Rates of nucleotide substitution vary greatly among plant mitochondrial, chloroplast, and nuclear DNAs

1 reference

https://pubmed.ncbi.nlm.nih.gov/18670809

12 December 2020

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Isotopic paleoceanography of the Caribbean and East pacific: role of panama uplift in late neogene time

1 reference

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12 December 2020

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Body size, metabolic rate, generation time, and the molecular clock

1 reference

https://pubmed.ncbi.nlm.nih.gov/18670809

12 December 2020

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Conventional taxonomy obscures deep divergence between Pacific and Atlantic corals

1 reference

https://pubmed.ncbi.nlm.nih.gov/18670809

12 December 2020

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Mass Spawning in Tropical Reef Corals

1 reference

https://pubmed.ncbi.nlm.nih.gov/18670809

12 December 2020

based on heuristic

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Slow mitochondrial DNA sequence evolution in the Anthozoa (Cnidaria).

1 reference

https://pubmed.ncbi.nlm.nih.gov/18670809

12 December 2020

based on heuristic

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A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences

1 reference

https://pubmed.ncbi.nlm.nih.gov/18670809

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Rates of mitochondrial DNA evolution in sharks are slow compared with mammals

1 reference

https://pubmed.ncbi.nlm.nih.gov/18670809

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Atypically low rate of cytochrome b evolution in the scleractinian coral genus Acropora

1 reference

https://pubmed.ncbi.nlm.nih.gov/18670809

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment

1 reference

https://pubmed.ncbi.nlm.nih.gov/18670809

12 December 2020

based on heuristic

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Mitochondrial DNA of the coral Sarcophyton glaucum contains a gene for a homologue of bacterial MutS: a possible case of gene transfer from the nucleus to the mitochondrion

1 reference

https://pubmed.ncbi.nlm.nih.gov/18670809

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions

1 reference

https://pubmed.ncbi.nlm.nih.gov/18670809

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The evolution of mating systems in tropical reef corals

1 reference

https://pubmed.ncbi.nlm.nih.gov/18670809

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Dynamic evolution of plant mitochondrial genomes: mobile genes and introns and highly variable mutation rates

1 reference

https://pubmed.ncbi.nlm.nih.gov/18670809

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0

1 reference

https://pubmed.ncbi.nlm.nih.gov/18670809

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Examination of the Montastraea annularis Species Complex (Cnidaria: Scleractinia) Using ITS and COI Sequences

1 reference

https://pubmed.ncbi.nlm.nih.gov/18670809

12 December 2020

based on heuristic

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MultiPhyl: a high-throughput phylogenomics webserver using distributed computing

1 reference

https://pubmed.ncbi.nlm.nih.gov/18670809

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

EST analysis of the cnidarian Acropora millepora reveals extensive gene loss and rapid sequence divergence in the model invertebrates

1 reference

https://pubmed.ncbi.nlm.nih.gov/18670809

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

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10.1007/S10126-008-9129-2

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

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PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

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