(Q33371538)

26 July 2017

title

Analysis of the Pseudoalteromonas tunicata genome reveals properties of a surface-associated life style in the marine environment (English)

1 reference

Pseudoalteromonas tunicata

26 July 2017

main subject

Pseudoalteromonas tunicata

1 reference

Anne Mai-Prochnow

4

0 references

Catherine Burke

Catherine Burke

5

0 references

Sacha Stelzer-Braid

Sacha Stelzer-Braid

8

0 references

Doralyn S Dalisay

Doralyn S Dalisay

7

0 references

Neil Saunders

Neil Saunders

9

0 references

Anahit Penesyan

Anahit Penesyan

6

0 references

Suhelen Egan

Suhelen Egan

13

0 references

Staffan Kjelleberg

Staffan Kjelleberg

12

0 references

Torsten Thomas

1

Torsten Thomas

1 reference

26 July 2017

Flavia F Evans

2

1 reference

26 July 2017

David Schleheck

3

1 reference

26 July 2017

Justin Johnson

10

1 reference

26 July 2017

Steve Ferriera

11

1 reference

26 July 2017

language of work or name

English

0 references

publication date

24 September 2008

1 reference

26 July 2017

1 reference

26 July 2017

volume

3

1 reference

26 July 2017

issue

9

1 reference

26 July 2017

page(s)

e3252

1 reference

Creative Commons Attribution 4.0 International

26 July 2017

copyright license

start time

24 September 2008

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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LipL32 is an extracellular matrix-interacting protein of Leptospira spp. and Pseudoalteromonas tunicata

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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Plant carbohydrate scavenging through tonB-dependent receptors: a feature shared by phytopathogenic and aquatic bacteria

21 June 2018

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The use of functional genomics for the identification of a gene cluster encoding for the biosynthesis of an antifungal tambjamine in the marine bacterium Pseudoalteromonas tunicata

21 June 2018

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Chromosomal context directs high-frequency precise excision of IS492 in Pseudoalteromonas atlantica

21 June 2018

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DNA-DNA hybridization values and their relationship to whole-genome sequence similarities

21 June 2018

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The mviN homolog in Burkholderia pseudomallei is essential for viability and virulence

21 June 2018

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The biosynthesis and regulation of bacterial prodiginines

21 June 2018

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Whole genome analysis of the marine Bacteroidetes'Gramella forsetii' reveals adaptations to degradation of polymeric organic matter

21 June 2018

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Inhibition of fungal colonization by Pseudoalteromonas tunicata provides a competitive advantage during surface colonization

21 June 2018

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A Sanger/pyrosequencing hybrid approach for the generation of high-quality draft assemblies of marine microbial genomes

21 June 2018

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Interpolated variable order motifs for identification of horizontally acquired DNA: revisiting the Salmonella pathogenicity islands

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536512

Curli biogenesis and function

21 June 2018

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A putative RNA-interference-based immune system in prokaryotes: computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and hypothetical mechanisms of action

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536512

The Pseudomonas aeruginosa ribbon-helix-helix DNA-binding protein AlgZ (AmrZ) controls twitching motility and biogenesis of type IV pili

21 June 2018

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Inhibition of Settlement by Larvae of Balanus amphitrite and Ciona intestinalis by a Surface-Colonizing Marine Bacterium

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536512

A colonization factor links Vibrio cholerae environmental survival and human infection

21 June 2018

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A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/Cas subtypes exist in prokaryotic genomes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536512

Evolution and development of the chordates: collagen and pharyngeal cartilage

21 June 2018

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Salmonella enterica virulence genes are required for bacterial attachment to plant tissue.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536512

Coping with cold: the genome of the versatile marine Antarctica bacterium Pseudoalteromonas haloplanktis TAC125

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536512

Competitive interactions in mixed-species biofilms containing the marine bacterium Pseudoalteromonas tunicata.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536512

Profiling the secretomes of plant pathogenic Proteobacteria

21 June 2018

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21 June 2018

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Marine biofouling on fish farms and its remediation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536512

Chitinase gene sequences retrieved from diverse aquatic habitats reveal environment-specific distributions

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536512

Biosynthesis of nonribosomal peptides1.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536512

Improved prediction of signal peptides: SignalP 3.0

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536512

Enzymatic characterization of a prokaryotic urea carboxylase

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536512

Environmental genome shotgun sequencing of the Sargasso Sea

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536512

ARB: a software environment for sequence data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536512

A functional cellulose synthase from ascidian epidermis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536512

The COG database: an updated version includes eukaryotes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536512

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536512

The two-component PhoR-PhoP system controls both primary metabolism and secondary metabolite biosynthesis in Streptomyces lividans

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536512

The REP2 repeats of the genome of Neisseria meningitidis are associated with genes coordinately regulated during bacterial cell interaction

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536512

Biotic interactions of marine algae

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536512

Climate warming and disease risks for terrestrial and marine biota

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536512

Occurrence, functions and biosynthesis of polyamides in microorganisms and biotechnological production

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536512

The PROSITE database, its status in 2002

21 June 2018

1 reference

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RelE, a global inhibitor of translation, is activated during nutritional stress

21 June 2018

1 reference

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Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes

21 June 2018

1 reference

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TIGRFAMs: a protein family resource for the functional identification of proteins

21 June 2018

1 reference

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Molecular properties of bacterial multidrug transporters

21 June 2018

1 reference

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Signal peptide-dependent protein transport in Bacillus subtilis: a genome-based survey of the secretome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536512

The structure and action of chitinases

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536512

Culturability and In situ abundance of pelagic bacteria from the North Sea

21 June 2018

1 reference

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The Pfam protein families database.

21 June 2018

1 reference

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Improved microbial gene identification with GLIMMER

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536512

Molecular analysis of the gene encoding a novel transglycosylative enzyme from Alteromonas sp. strain O-7 and its physiological role in the chitinolytic system

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536512

Identification of a marine agarolytic pseudoalteromonas isolate and characterization of its extracellular agarase

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536512

The Wzz (Cld) Protein in Escherichia coli : Amino Acid Sequence Variation Determines O-Antigen Chain Length Specificity

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536512

A distinctive class of integron in the Vibrio cholerae genome.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536512

Bacterial resistances to toxic metal ions--a review

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536512

Purification and characterization of a novel antibacterial protein from the marine bacterium D2

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536512

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536512

The pilE gene product of Pseudomonas aeruginosa, required for pilus biogenesis, shares amino acid sequence identity with the N-termini of type 4 prepilin proteins

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536512

Molecular genetics of a chromosomal locus involved in copper tolerance in Escherichia coli K-12.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536512

A Salmonella typhimurium virulence gene linked to flg.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536512

Protein phosphorylation and regulation of adaptive responses in bacteria

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536512

Nucleotide sequence of IS492, a novel insertion sequence causing variation in extracellular polysaccharide production in the marine bacterium Pseudomonas atlantica

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536512

Isolation and structure elucidation of a novel yellow pigment from the marine bacterium Pseudoalteromonas tunicata.

21 June 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0003252

Low densities of epiphytic bacteria from the marine alga Ulva australis inhibit settlement of fouling organisms

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0003252

Unravelling the role of the ToxR-like transcriptional regulator WmpR in the marine antifouling bacterium Pseudoalteromonas tunicata

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0003252

Correlation between pigmentation and antifouling compounds produced by Pseudoalteromonas tunicata.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0003252

A mannose-sensitive haemagglutinin (MSHA)-like pilus promotes attachment of Pseudoalteromonas tunicata cells to the surface of the green alga Ulva australis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0003252

In vitro biosynthesis of violacein from L-tryptophan by the enzymes VioA-E from Chromobacterium violaceum.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0003252

Unusual rise in mercury-resistant bacteria in coastal environs.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0003252

Multiple genes involved in chitin degradation from the marine bacterium Pseudoalteromonas sp. strain S91.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0003252

Comparative Genome Analysis in the Integrated Microbial Genomes (IMG) System

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0003252

Intense hydrolytic enzyme activity on marine aggregates and implications for rapid particle dissolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0003252

The regulator CdsS/CdsR two-component system modulates expression of genes involved in chitin degradation of Pseudoalteromonas piscicida strain O-7

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536512

Comparison of type IV-pilin genes of Pseudomonas aeruginosa of various habitats has uncovered a novel unusual sequence

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536512

Shell disease syndrome in the edible crab, Cancer pagurus--isolation, characterization and pathogenicity of chitinolytic bacteria

31 October 2018

1 reference

12 December 2020

Characterization of the binding of diarrheagenic strains of E. coli to plant surfaces and the role of curli in the interaction of the bacteria with alfalfa sprouts

1 reference

12 December 2020

On the origins of the extracellular matrix in vertebrates

1 reference

12 December 2020

Tolerance to cadmium of free-living and associated with marine animals and eelgrass marine gamma-proteobacteria

1 reference

12 December 2020

Inhibition of algal spore germination by the marine bacterium Pseudoalteromonas tunicata

1 reference

12 December 2020

Effect of alginic acid decomposing bacterium on the growth of Laminaria japonica (Phaeophyceae)

1 reference

12 December 2020

Profiling the secretomes of plant pathogenic Proteobacteria

1 reference

12 December 2020

10.1371/JOURNAL.PONE.0003252

Identifiers

DOI

1 reference

release_7vxzlazhqjcz7awczw3sq7yox4

26 July 2017

0 references

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/7vxzlazhqjcz7awczw3sq7yox4

24 November 2022

mapped directly with Wikidata item

PMC publication ID

2536512

1 reference

26 July 2017

1 reference