(Q33372283)

26 July 2017

title

The RNA-binding domain of bacteriophage P22 N protein is highly mutable, and a single mutation relaxes specificity toward lambda (English)

1 reference

26 July 2017

1 reference

Alexis I Cocozaki

1

1 reference

26 July 2017

Ingrid R Ghattas

series ordinal

2

1 reference

26 July 2017

Colin A Smith

series ordinal

3

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26 July 2017

language of work or name

English

0 references

publication date

26 September 2008

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26 July 2017

published in

Journal of Bacteriology

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26 July 2017

volume

190

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26 July 2017

issue

23

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26 July 2017

page(s)

7699-7708

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Bacteriophage P22 antitermination boxB sequence requirements are complex and overlap with those of lambda

26 July 2017

cites work

1 reference

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A new look at bacteriophage lambda genetic networks

21 June 2018

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Arginine-rich motifs present multiple interfaces for specific binding by RNA.

21 June 2018

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Missense meanderings in sequence space: a biophysical view of protein evolution

21 June 2018

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Low energy CD of RNA hairpin unveils a loop conformation required for lambdaN antitermination activity

21 June 2018

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21 June 2018

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Structural mimicry in the phage phi21 N peptide-boxB RNA complex

21 June 2018

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Protein Explorer: easy yet powerful macromolecular visualization.

21 June 2018

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Antitermination in bacteriophage lambda. The structure of the N36 peptide-boxB RNA complex

21 June 2018

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Themes in RNA-protein recognition.

21 June 2018

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Adaptive recognition in RNA complexes with peptides and protein modules

21 June 2018

1 reference

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Processive antitermination

21 June 2018

1 reference

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Solution structure of P22 transcriptional antitermination N peptide-boxB RNA complex

21 June 2018

1 reference

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Analysis of bacteriophage N protein and peptide binding to boxB RNA using polyacrylamide gel coelectrophoresis (PACE).

21 June 2018

1 reference

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Selection of RNA-binding peptides in vivo

21 June 2018

1 reference

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Smoothness within ruggedness: the role of neutrality in adaptation.

21 June 2018

1 reference

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Comparative molecular biology of lambdoid phages

21 June 2018

1 reference

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Structural variety of arginine-rich RNA-binding peptides

21 June 2018

1 reference

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A minor Q-independent pathway for the expression of the late genes in bacteriophage lambda

21 June 2018

1 reference

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"N" transcription antitermination proteins of bacteriophages lambda, phi 21 and P22.

21 June 2018

1 reference

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Conservation of genome form but not sequence in the transcription antitermination determinants of bacteriophages lambda, phi 21 and P22.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2583623

Overexpression of N antitermination proteins of bacteriophages lambda, 21, and P22: loss of N protein specificity

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2583623

Effects of all single base substitutions in the loop of boxB on antitermination of transcription by bacteriophage lambda's N protein

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2583623

Sequence-specific recognition of RNA hairpins by bacteriophage antiterminators requires a conserved arginine-rich motif

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2583623

Recent development of the neutral theory viewed from the Wrightian tradition of theoretical population genetics

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2583623

Arginine-mediated RNA recognition: the arginine fork.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2583623

Specificity of genetic elements controlling regulation of early functions in temperate bacteriophages

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2583623

Resolving the motional modes that code for RNA adaptation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2583623

Evolvability of the mode of peptide binding by an RNA.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2583623

Morphing molecular specificities between Arm-peptide and NUT-RNA in the antitermination complexes of bacteriophages lambda and P22.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2583623

Differential modes of recognition in N peptide-boxB complexes

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2583623

Achieving Specificity in Selected and Wild-Type N Peptide−RNA Complexes: The Importance of Discrimination against Noncognate RNA Targets

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2583623

Context and conformation dictate function of a transcription antitermination switch

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2583623

Origin of the neutral and nearly neutral theories of evolution.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2583623

Selection of RNA-binding peptides using mRNA-peptide fusions

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2583623

31 October 2018

An RNA-binding chameleon

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2583623

Context-dependent secondary structure formation of a designed protein sequence

31 October 2018

1 reference

12 December 2020

NMR structure of the bacteriophage lambda N peptide/boxB RNA complex: recognition of a GNRA fold by an arginine-rich motif

1 reference

12 December 2020

Continuity in evolution: on the nature of transitions

1 reference

12 December 2020

Clustered arginine residues of bacteriophage lambda N protein are essential to antitermination of transcription, but their locale cannot compensate for boxB loop defects

1 reference

12 December 2020

Identifiers

DOI

10.1128/JB.00997-08

1 reference

26 July 2017

1 reference

26 July 2017

1 reference