(Q33375534)

26 July 2017

1 reference

title

easyExon--a Java-based GUI tool for processing and visualization of Affymetrix exon array data (English)

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26 July 2017

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Tsun-Po Yang

4

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author name string

Ting-Yu Chang

1

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26 July 2017

Yin-Yi Li

2

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26 July 2017

Chih-Hung Jen

3

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26 July 2017

Chi-Hung Lin

5

1 reference

26 July 2017

Ming-Ta Hsu

6

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26 July 2017

Hsei-Wei Wang

7

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26 July 2017

publication date

14 October 2008

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26 July 2017

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26 July 2017

volume

9

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26 July 2017

page(s)

432

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FIRMA: a method for detection of alternative splicing from exon array data

26 July 2017

cites work

1 reference

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MADS: a new and improved method for analysis of differential alternative splicing by exon-tiling microarrays

21 June 2018

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X:Map: annotation and visualization of genome structure for Affymetrix exon array analysis.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579307

An annotation infrastructure for the analysis and interpretation of Affymetrix exon array data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579307

Splicy: a web-based tool for the prediction of possible alternative splicing events from Affymetrix probeset data

21 June 2018

1 reference

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Alternative splicing and differential gene expression in colon cancer detected by a whole genome exon array.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579307

Probe selection and expression index computation of Affymetrix Exon Arrays

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579307

Nova regulates brain-specific splicing to shape the synapse

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579307

Structural dynamics of alpha-actinin-vinculin interactions

21 June 2018

1 reference

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ANOSVA: a statistical method for detecting splice variation from expression data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579307

Revealing global regulatory features of mammalian alternative splicing using a quantitative microarray platform

21 June 2018

1 reference

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Detecting tissue-specific regulation of alternative splicing as a qualitative change in microarray data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579307

Bioconductor: open software development for computational biology and bioinformatics

21 June 2018

1 reference

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Caldesmon mutant defective in Ca(2+)-calmodulin binding interferes with assembly of stress fibers and affects cell morphology, growth and motility

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579307

Alternative splice variant of actinin-4 in small cell lung cancer

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579307

Alpha-actinin revisited: a fresh look at an old player

21 June 2018

1 reference

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Genome-wide survey of human alternative pre-mRNA splicing with exon junction microarrays

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579307

The Gene Ontology (GO) database and informatics resource

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579307

Exploration, normalization, and summaries of high density oligonucleotide array probe level data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579307

Expression profiling identifies a novel alpha-methylacyl-CoA racemase exon with fumarate hydratase homology

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579307

Pre-mRNA splicing and human disease

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579307

Genomewide analysis of mRNA processing in yeast using splicing-specific microarrays

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579307

Protein diversity from alternative splicing: a challenge for bioinformatics and post-genome biology

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579307

The normal structure and function of CD44 and its role in neoplasia

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579307

Differential expression of two fibroblast growth factor-receptor genes is associated with malignant progression in human astrocytomas.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579307

A new variant of glycoprotein CD44 confers metastatic potential to rat carcinoma cells

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579307

oneChannelGUI: a graphical interface to Bioconductor tools, designed for life scientists who are not familiar with R language.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579307

Identification of differentially regulated splice variants and novel exons in glial brain tumors using exon expression arrays.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579307

An RNA map predicting Nova-dependent splicing regulation

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579307

Genome-wide analysis of mouse transcripts using exon microarrays and factor graphs.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579307

31 October 2018

Identifiers

DOI

10.1186/1471-2105-9-432

1 reference

journals/bmcbi/ChangLJYLHW08

26 July 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

26 July 2017

1 reference